Astyanax mexicanus (Mexican tetra): 103029595
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Entry
103029595 CDS
T05042
Symbol
tiam1a
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04530
Tight junction
amex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
103029595 (tiam1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
103029595 (tiam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103029595 (tiam1a)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
103029595 (tiam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
PDZ_6
SOS1_NGEF_PH
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
103029595
NCBI-ProteinID:
XP_022537150
Ensembl:
ENSAMXG00000008650
LinkDB
All DBs
Position
20:complement(36748262..36897522)
Genome browser
AA seq
1633 aa
AA seq
DB search
MGNVESQNGDHAFYGEQGHLSRKQTSRSLRITSKQSRRSRHASSSKAEHRSSEASTRSSS
TPSIPQSLAENGLEPFDGTDALGEFGDPIWVDRVAMNLRPMSFHDHPGVDPATTPGSEDG
GDTVVGDGEDDEGLYTGEETYLQRVSDAPEDSSNSFKKKRSKSADMWREDSLEFSLSDLS
QENLTSTEEILQDPNGEDGDYHRGHESHSGERANSLDELCTQKSATLRSSRKPRYKYGRD
SERSAGGEMNDELLSPGEEDNGGYGAYTLPCRRSHCLSEGPPSHQGALCSSMQGRRAQTS
HDITAGEGSEYGDSGIDGVATEVEPQSRHCKAMSASFSVYSAASGSVFAGSDSGSSSGGG
GTERSGRDQGVYENFRQELELNSRQTRESLEEAGSAVSDERSSGTMSSAYQSDALLNMAQ
GTVRKAGALAVKNFLVHKKNKKVEPATRRKWKRYWVSLKGCTLFFYETDGRSGIDHNSIP
KHAVWAENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSGQTELENWITAIHSACATAVA
RQHHREDTVRFLRSEIKKLEQKIDMDEKMKKMGDMQLSAVTDAKKRKTILEQIFLWEQNL
EQFHMDLFRFRCYLSSLQGGELPNPKRLLAFASRPTKLAMGRLGIFSVSSFHTLVAARME
SGVRRRTQALSRSSSKRKSRFSSLWGLDTTSKKKSKGRPSINQVFVEGEEPMKKSMERMF
EDSTKESLKDQSRSIKSLPQPNTDTELWLPDYLTPSWLSLPNDQPVLAIIQPGETTYEAL
EAVCKAHNLDPSKHYLRLKFLIDNQVQLYVPNPEEELSDLLYKEIEICTKTTKVVQFDRD
ESCTIGYGFSVAVVDEDGVQQLHITDVKAGGLAFKKGLRAGDEILQLNDKDGSVLELSDM
QAAFSLPSLTLTVSTIPSTEDCQHCPPLPRRSDTPHHLCTDIFSQNQEEILDEVPGLVLE
SPGVEERSSLAKESNEDGLGYESDSGTGHKSTEQVTAFCRSLHDMNPVEALPSSSSSSSS
SSSCIPSPISPVPAPATQRQLSDADKLRKVISELVDTERTYVKDLNCLIERYLTPLQKEH
FLSQDELDVLFGNLPEMVEFQVEFLKTLEDGTRLVTDLDKLERVDQFKKVLFSLGGSFLY
YADRFKIYSAFCASHTKVPKVLTKAKTDPEFKAFLAERNPRQQHSSTLESYLIKPIQRVL
KYPLLLRELYCLTDPDSEEHYHLNVAIKAMNKVASHINEMQKIHEEYGAVFDQLISEQSA
DKKEVADLSMGDLLLHATVAWINPPSSLMKGKKDPELAAFVFRTAVVFVYKDCSKQKKKI
GTSHRASVSDERDPFRFRYMISTDALQVRTPTNSEGTAVCEIVHVRSESEGRPERTFHIC
CSSHDSKKDFLKTVHSVLRDKQRRQLMKTESLPLNQQYIPFGGKRLCALKGVRPTMSRAV
SDPPRALGRRKLIRNRFTIDTDIVFDNGSSQDLPSSADSPPPQSQPTPPQNTRDTDRWVE
EQFDLRLYDRQTDVKETDILSDDDEYCESVKGSLTEPSLEESFEALIAEAEEDGNGEVAQ
EEVEEGVKEEIGGLNQSSEDKLALKLPEKSHGPLRLTPLRKQCAVEGAAAEREREVIWVR
RDDFNSGCNSDIF
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgtggagagccagaatggagatcacgccttctacggtgagcagggccacctg
tctcgcaagcagacgtccaggtcactccggatcaccagcaagcagtcccgtcgctcacgg
catgcctcatccagcaaggcagagcaccgcagctctgaggcaagtacacgttccagcagc
acacccagcatcccgcagtctcttgccgaaaatggcctggagccatttgatggaacggac
gctcttggagagttcggcgaccctatctgggtggacagagtagccatgaatctgcggccc
atgtcttttcatgaccaccctggcgtggacccagccaccacgccaggctcggaggacggt
ggtgacacggtggtgggagatggagaggacgatgagggcctctacacaggcgaggaaacc
tacctgcagagggtaagtgatgcacctgaggatagcagcaacagcttcaagaagaagcgc
tccaagtcagcagacatgtggcgggaggactccctggagttctctctctcagaccttagc
caagagaacctgaccagcacagaggagatccttcaggatccaaacggagaggacggggac
taccacaggggacatgagagtcactcaggggagagggccaactctttggatgaactctgc
actcagaagtccgccaccctccgcagctctcggaaacctcgctacaagtacggtcgggac
agtgaacgctctgcaggtggggagatgaacgatgagttgttgtctccaggagaggaggac
aatggcgggtacggagcatacaccctaccctgtcggcgatcacactgtctttcggaaggt
cctcctagccaccagggagcactgtgttccagtatgcaggggcgacgtgcacagacttca
catgacatcacagcaggcgagggaagcgagtacggagatagcggcatcgatggcgtggca
accgaggtggagccccagtcccggcactgcaaggccatgtccgcctccttctccgtctac
tcagctgccagcggcagtgtgtttgcaggcagcgacagcggcagcagcagtggtggagga
ggtacagagcgctcgggccgggaccagggagtttacgagaacttcaggcaggagctggag
ctgaactcacggcagacgcgagagagtctggaggaggcggggtcagccgtcagcgacgag
aggagcagcggcaccatgagctccgcctatcagtcggacgccctgcttaacatggcgcag
ggcacggtgcgcaaggccggagcattggccgtcaagaactttctggtgcataagaagaat
aagaaggtggagccagcgaccaggcgcaagtggaagcgctactgggtgtcactgaaagga
tgcactctgttcttctacgagactgatgggcgctcagggattgatcacaacagcattcct
aaacatgcggtgtgggctgagaacagcatcgtacaggctgttcctgaacatcccaaaaag
gactttgtgttctgcctcagtaactctctgggagatgccttcctgttccagacctcagga
cagacagagctggaaaactggatcacggccatccactcggcgtgcgccacggccgtggcc
cggcagcaccaccgcgaggacactgtacgatttctgcgctcggagatcaagaagctggag
cagaagattgacatggatgagaagatgaagaagatgggagacatgcagctctcggccgtc
actgatgccaaaaagaggaagaccatcctggaacagatcttcctgtgggagcagaacctg
gagcagtttcacatggatctgttccgtttccgttgttacctctccagcctgcagggcggc
gagcttcccaaccccaaacgcctgctggctttcgcctcacgccccaccaaactagccatg
ggtcgcctgggcatcttctccgtctcgtcctttcatacactggttgcagcgaggatggag
agcggggtccggaggcggacgcaggccttgtctcgctcgtccagcaagcgtaagagccga
ttctcatcgctgtggggtctggacactacctcaaagaagaagagcaaaggcagacccagc
atcaaccaggtgtttgtggaaggagaggaaccaatgaagaaaagcatggagcgcatgttt
gaggattcgaccaaggaaagcttgaaggatcagagtcggtccataaaaagccttcctcag
cctaacacggacaccgagttatggcttcctgactacctcacaccgtcctggctttctttg
ccgaacgaccagccagtcctggccatcatacagccaggagaaaccacatatgaagcgttg
gaggctgtttgtaaggcccacaacctggacccttccaagcattatctccgcctgaagttt
cttatcgacaatcaagtgcaattgtatgtcccaaaccctgaagaggagctctcagatctg
ctctacaaagagattgaaatttgtaccaaaactaccaaagtcgtccagtttgatagagac
gagtcctgcaccattggttatggtttctcagtagctgtggtggatgaggacggtgtacag
cagcttcatatcacagatgtaaaagctggaggcctggcctttaagaaaggtctgagagca
ggtgatgagatcctgcagctgaatgataaagacgggagtgtgttggagctgtcggacatg
caggccgcgttctctctgccctccctcacccttacagtcagcaccataccgtcgactgag
gactgccagcactgtccaccgctgcctcgccgctccgatacaccacaccacctctgcaca
gacatcttctcccaaaaccaagaggaaatcctggatgaagtgcctggcctggtgttggag
agtccaggtgtagaggaaaggtccagtttagccaaagagagtaatgaagatggcctggga
tacgagtcggactctggcactggacacaagagtacggagcaagtgaccgcattctgtcgc
agccttcatgacatgaatcctgtggaggccctgccatcgtcctcctcttcctcctcctcc
tcttcctcatgtatacccagccccatctcccctgtgcccgcccccgccacccagcggcag
ctgtcagacgcagacaaactccggaaggtcatcagtgagctggtggacacggagcgcacc
tacgttaaggatttgaactgtctaatagagcggtacctgacgcctctgcagaaggaacac
ttcctctctcaggatgagctggacgttctctttgggaacctgccggagatggtggagttt
caggtggagtttctaaagactctggaagatggaactagactggttacagatttagacaag
ctcgagagggtggaccagtttaagaaagtgctcttttctcttggaggctccttcttgtac
tatgcggaccgcttcaaaatttacagcgctttctgtgccagccatacaaaagtcccaaag
gtcctcaccaaagccaagactgacccagagtttaaggcgtttctggctgaaaggaacccc
agacagcagcactcctccactctggagtcctatctgatcaagcccatccagagggtgctg
aaataccctctgctgctgcgagagctctactgcctcactgaccccgacagtgaggagcac
taccatctcaatgttgctattaaagccatgaacaaagtggcgagccacatcaacgagatg
cagaagatccatgaggagtacggagctgtgttcgaccagctcatcagtgaacagagcgca
gacaagaaagaggtggctgatttgtctatgggtgacttattactccacgctactgtggcc
tggatcaaccccccatcatctctgatgaagggaaagaaagaccccgagctcgctgccttc
gttttcaggacagccgtcgtttttgtgtacaaagattgctccaagcagaagaaaaaaatc
ggaacttctcacagggcttcagtatctgatgagcgagacccgtttcggtttagatacatg
atctccacagatgctcttcaggtccgcacccccaccaactcagagggaacagcagtgtgt
gagattgttcatgtaagatcagaatctgaggggagaccagagaggacctttcatatctgc
tgcagttctcatgacagtaagaaggacttcctgaagacagtgcactcagtcctgagggat
aaacagcgtcgacagttgatgaagacagagagtttacctctgaatcagcagtacattcct
tttggagggaaacgcctgtgtgcactgaaaggagttcggcccacaatgagcagagcagtt
tcagatccacctcgagctctcggccgcaggaagctgatccgcaaccgcttcaccatcgac
acagacatagtcttcgacaacggctccagccaggacctgccctcctctgcagactcccca
ccacctcaaagccagcctacacctcctcagaacactcgcgacaccgaccgctgggtggag
gagcagtttgacctgcggctgtacgacagacagacggacgtgaaggagacggacattctc
agcgatgacgacgagtactgcgagtcggtgaagggttctttaaccgagccgagtctggaa
gagtcgttcgaggctcttattgcagaagcggaggaggacgggaacggggaggtagcgcag
gaggaagtggaggagggtgtaaaggaggaaatcggtggtctgaatcagagctctgaggac
aagctggctctcaagctgcctgagaagtctcacggcccgctgaggctgaccccgctgagg
aagcagtgcgctgtggagggcgccgctgccgagagggagagggaggtcatctgggtccgc
agagatgacttcaacagcggctgcaacagtgacatcttctga
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integrated database retrieval system
