Astyanax mexicanus (Mexican tetra): 103032032
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Entry
103032032 CDS
T05042
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04060
Cytokine-cytokine receptor interaction
amex04672
Intestinal immune network for IgA production
amex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
103032032 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
103032032 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
103032032 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
amex04052
]
103032032 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
amex00536
]
103032032 (cxcl12a)
Cytokines and neuropeptides [BR:
amex04052
]
Cytokines
Chemokines
103032032 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
amex00536
]
Heparan sulfate / Heparin
Chemokines
103032032 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
103032032
NCBI-ProteinID:
XP_022540503
Ensembl:
ENSAMXG00000037212
UniProt:
A0A3B1JZL8
LinkDB
All DBs
Position
7:complement(33326809..33336439)
Genome browser
AA seq
99 aa
AA seq
DB search
MELKAVLLAALITVAVYGTISHAKPISLVERCWCRSTVNTVPQRNIRELKFVHTPNCPFQ
VIAKLKNAKEVCINPETKWLQQYLKNALEKMKKAKQQSN
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaagccgtcttactagcagcgctcatcacggtggccgtctatgggactatt
tcacacgccaagcccatcagtctggttgaaagatgctggtgtcgctcaacagtcaacaca
gtcccacagaggaacatccgtgagctgaagtttgtccacacgcccaactgccccttccaa
gtcattgccaagctgaagaacgccaaagaagtgtgcatcaaccctgagaccaaatggctg
cagcagtacctaaagaacgcccttgaaaaaatgaagaaggccaagcaacagtccaactaa
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