Astyanax mexicanus (Mexican tetra): 103032232
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Entry
103032232 CDS
T05042
Symbol
rapgef4b
Name
(RefSeq) rap guanine nucleotide exchange factor 4-like isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04081
Hormone signaling
amex04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
103032232 (rapgef4b)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
103032232 (rapgef4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103032232 (rapgef4b)
Membrane trafficking [BR:
amex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
103032232 (rapgef4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
103032232
NCBI-ProteinID:
XP_007244235
UniProt:
A0A8T2M2E0
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All DBs
Position
5:55337629..55369707
Genome browser
AA seq
1007 aa
AA seq
DB search
MVAVYTSAQSVASSEWIVCLDKRPGERSGEDVDIILARLKVVKAFEKFHPSLLQQICLCG
FYEYLEKGITLYRQGDIGTSWYAVLSGSLDVKVSETANYQDAVTICTLGIGTAFGESILD
NTPRHATIVSRENSELLRIEQREFKTLWEKYRQCMAGLLAPPYGVMESGASNDRMPDKDS
LRSDSDALNFLSKNHNKVPSEKLLRAGKILRNAILARAPHMIRDRKYHLKTYRQCCVGTE
LVDWQLQQSSCVHSRAHAVGMWQALLEEGILNHVDQELNFQDKYLFYRFLDDEDEEAVLP
SEDEKREAEEELQETLLFLSQIGPDSHMRMILRKPPGQRTPEDLEIIYDELLHIKALAHL
SNTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIVQKGSVNVVIYGKGVVCTLHEGDD
FGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHDKDVLVLQKS
LRPSSHGNVPAHFKYTVMAGTPEKILEHLLETMRLDINFADPDPALDDFVLMHCVFMPNS
QLCPALLAHYHSQASQGSEQERMEYAVASKRRVLSLALRWASLQAHHLLEDDTSLSFLEE
LYGFVSNDVRVLRPLKELVPELEKIIRQYPDDARTSQKKHKVLLRQFSSGEERLAKKQPM
RSFDDILLKVYCADHTYTTIRVPVLATGREVTAAVAEKLGSTEELLLISLSASAEKQILK
PNDVSVFQSLGVNGRMFVCTREQLDSLAPLPEQEGPSTGSMSSFELMSSKDLAFQMTQYD
WELFSCVHEYELVYHTFGRQAYRRSTANLELFLRRFNQVQLWVVTEVSLCGTLSKRVQLL
KKFIKIAAHCREFRNLNSFFAIIMGMCNPAVSRLTQTWEKLPSKFKKFYAEFESLLDPSR
NHRVYRLTVAKMEPPIIPFMPLLIKDMTFTHEGNKTFVDGLVNFEKMRLIANTIRAVRHC
RSQPFNVEASPASKNPQEVRNYVRQLSVIDNQRTLSQLSFRLEPRRT
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggtgtacacctccgcccagtcagtcgcatccagcgagtggatcgtctgcctt
gataagaggccaggagagcgctctggggaggatgtggacataattttggctaggctgaag
gtagtgaaggccttcgagaagttccaccccagcctccttcagcaaatctgcttgtgtggc
ttctatgaatatctggagaaaggaatcaccttgtatcggcaaggagatattggaacaagc
tggtacgctgttctgtctggctcactcgatgtgaaggtgtctgaaacagccaattatcag
gatgcagtaactatctgtacactgggaatagggacagcgtttggagagtctatcctggac
aacaccccacgacatgccaccatcgtcagccgagagaacagtgagctcctgcgcattgaa
cagcgggagttcaagaccctgtgggagaaatacaggcagtgcatggcaggacttctcgcc
cctccctatggggtgatggagagcggagctagcaatgaccgaatgccagacaaggacagt
ctcagatcagattcagatgcgctgaatttcctgtcaaaaaaccataacaaggtcccatca
gagaagcttttaagagcagggaagatcttacgtaatgctattctagcgagagccccacac
atgatcagagacagaaagtaccatctaaaaacatacaggcagtgctgcgtgggcactgaa
ctggttgattggcagctacagcagagttcatgtgttcacagtcgagcccatgctgttggc
atgtggcaggcgttactggaggaggggattcttaaccatgtggaccaggagcttaacttc
caggacaagtacctgttctaccgtttccttgacgatgaggatgaggaggcagtgttgccc
agtgaagatgaaaagagagaagcagaggaagagctgcaggagacactgctcttcctctct
cagatcggtccagactcacacatgcgcatgatcctcagaaagccgccgggacagaggacc
cctgaagatctggagattatttatgatgaactgctgcatattaaagctctcgcccacctc
tctaatactgtgaagagagagcttgctggcgtcctcatttttgagtcacatgccaaagct
ggcacagtcttgtttaatcagggtgaagaaggcacctcctggtacatcgtccagaagggc
tcggtaaatgttgtcatctatggcaagggggtggtttgcaccctgcatgaaggtgatgac
ttcggtaaattagcgctggtcaatgacgctcctcgcgctgcctccatcgtactgagagag
gacaactgccacttcctgcgagtggataaagaagactttaaccgcatactcagggatgtg
gaggcaaacactgtacgccttaaggaacatgataaagatgtcttggtgcttcagaagagt
ctccgcccctccagccacggaaatgttcctgcacacttcaagtacactgtgatggcaggg
accccagagaagattctagaacatttgctggagacaatgcgtctggacattaattttgct
gacccagatcctgctctggatgattttgttctcatgcactgtgtcttcatgcccaacagc
cagctgtgtccagctcttctggctcactaccattctcaggcatctcagggttcagaacaa
gagcgcatggagtacgctgtggccagtaaaagacgtgtactgagcctggctctgcggtgg
gcatccctgcaagcccaccatctactggaggatgacacttcactcagctttctggaggag
ctgtatgggtttgtatcgaatgacgtcagagttttacgtccactgaaagaactggttcca
gaactggagaaaatcatcagacagtaccctgatgatgctcggacttcacagaaaaagcac
aaagtccttctccgacagttcagctctggagaagagaggctggcaaagaaacagccaatg
aggagctttgatgacatactcctgaaagtctactgtgctgatcacacctacaccaccatc
cgagttcctgttctggcaaccgggagagaggtgacagcagccgtggctgagaaactagga
tccactgaggagctgcttctgatcagccttagtgcttctgcagaaaagcagattttgaag
cccaatgatgtgtcagtgttccagtcactgggagtgaatggacggatgtttgtctgtacg
agagaacagctcgactcactggctcctcttccagagcaagaaggtccttccacaggttct
atgtccagttttgaactgatgagttctaaagacctggcctttcagatgacccagtatgac
tgggagctcttcagctgtgtgcacgagtatgaactggtatatcacacgtttgggcggcag
gcataccgtcgctccacagccaacctggagctgttcctgcggcgctttaaccaggtgcag
ctctgggtagtgactgaggtcagcctgtgcggcacactcagcaaacgggtgcagctgctg
aagaagtttataaagatcgctgctcactgcagagagttcaggaacctcaactccttcttc
gccattattatgggcatgtgcaatccagccgtcagccgactcactcagacatgggagaag
ctacctagtaaatttaagaagttctacgctgagttcgagagtttactggatccatccagg
aaccaccgcgtgtaccgcctcactgtggctaagatggaacccccaatcattccctttatg
cccctcctcattaaagacatgactttcactcatgagggcaacaagacgtttgttgatgga
ctggtgaattttgaaaaaatgcgtttgattgctaacacgatccgggcagtgagacactgc
aggagtcaacccttcaatgttgaggcgtctcctgccagtaagaatccacaggaagtgcgg
aactacgtgcgtcagctctctgtgattgacaaccagaggaccctatcacaactctccttc
agactggaaccaagacggacctaa
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