Astyanax mexicanus (Mexican tetra): 103032568
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Entry
103032568 CDS
T05042
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04060
Cytokine-cytokine receptor interaction
amex04150
mTOR signaling pathway
amex04210
Apoptosis
amex04217
Necroptosis
amex04350
TGF-beta signaling pathway
amex04620
Toll-like receptor signaling pathway
amex04621
NOD-like receptor signaling pathway
amex04622
RIG-I-like receptor signaling pathway
amex04625
C-type lectin receptor signaling pathway
amex04920
Adipocytokine signaling pathway
amex05132
Salmonella infection
amex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103032568 (tnfa)
04350 TGF-beta signaling pathway
103032568 (tnfa)
04150 mTOR signaling pathway
103032568 (tnfa)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
103032568 (tnfa)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
103032568 (tnfa)
04217 Necroptosis
103032568 (tnfa)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
103032568 (tnfa)
04621 NOD-like receptor signaling pathway
103032568 (tnfa)
04622 RIG-I-like receptor signaling pathway
103032568 (tnfa)
04625 C-type lectin receptor signaling pathway
103032568 (tnfa)
09152 Endocrine system
04920 Adipocytokine signaling pathway
103032568 (tnfa)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103032568 (tnfa)
09171 Infectious disease: bacterial
05132 Salmonella infection
103032568 (tnfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
amex04052
]
103032568 (tnfa)
00536 Glycosaminoglycan binding proteins [BR:
amex00536
]
103032568 (tnfa)
Cytokines and neuropeptides [BR:
amex04052
]
Cytokines
Tumor necrosis fators
103032568 (tnfa)
Glycosaminoglycan binding proteins [BR:
amex00536
]
Heparan sulfate / Heparin
Cytokines
103032568 (tnfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
VirB8
pPIWI_RE_X
Motif
Other DBs
NCBI-GeneID:
103032568
NCBI-ProteinID:
XP_015457510
Ensembl:
ENSAMXG00000011611
UniProt:
A0A8B9K0X3
W5KWH0
LinkDB
All DBs
Position
3:37195991..37198645
Genome browser
AA seq
234 aa
AA seq
DB search
MTSQNQVILDVDPAQVIVSRTKASTAWSSRWKLCMALLAIAVCAAGAVFFTFNKTNNKPD
STDDIRHTLRQVSNSATGAIHLSGHYNPNVSNTSVEWTDSEDQSFSSGGLVLKNNEIHIP
HNGLYFVYSQASYRVNCNLKTGESEDESAVHLSHMVSRWSNSYPKYQPLLSTVRTACRKI
HSSEDSGEQWFSAVYVGAIFKLEAGDRLCTDMDSKMLPEVETESGKTFFGVFSL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtcaaaatcaagtcattttagatgtggacccagcccaggtgattgtcagcaga
acaaaggcttctacagcatggtcgagcagatggaagctgtgtatggctcttctggctata
gctgtgtgcgctgctggtgctgtcttctttaccttcaacaagaccaataacaagccagac
agtactgatgatatcagacacacactaaggcaagtgtccaacagtgcaacaggtgccatt
cacttgtcaggtcactacaacccaaatgtgtccaacacatctgtggagtggacggatagc
gaggaccagtcgttcagcagtggaggcctggtgctaaagaacaacgaaatccacatccca
cacaatggcctttacttcgtctacagccaagcgtcctacagggtcaactgcaacttgaag
acaggtgaaagcgaagatgagtcggctgtgcacctgagtcacatggtgtcccgctggtcc
aactcataccccaaataccagcctctgctgagcaccgtgagaacagcctgcaggaaaatc
cactccagtgaagactccggggagcagtggttcagcgccgtctacgttggagccatcttt
aagctggaggctggagaccgactctgcacagacatggactccaaaatgctgccagaagtg
gagactgagagtgggaagacattttttggcgtgttttctttgtga
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integrated database retrieval system
