Astyanax mexicanus (Mexican tetra): 103032641
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Entry
103032641 CDS
T05042
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb
KO
K04359
platelet-derived growth factor subunit A
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04020
Calcium signaling pathway
amex04510
Focal adhesion
amex04540
Gap junction
amex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103032641 (pdgfbb)
04020 Calcium signaling pathway
103032641 (pdgfbb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103032641 (pdgfbb)
04540 Gap junction
103032641 (pdgfbb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
103032641 (pdgfbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
amex04052
]
103032641 (pdgfbb)
00536 Glycosaminoglycan binding proteins [BR:
amex00536
]
103032641 (pdgfbb)
Cytokines and neuropeptides [BR:
amex04052
]
Cytokines
Growth factors (RTK binding)
103032641 (pdgfbb)
Glycosaminoglycan binding proteins [BR:
amex00536
]
Heparan sulfate / Heparin
Growth factors/receptors
103032641 (pdgfbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
103032641
NCBI-ProteinID:
XP_022524203
Ensembl:
ENSAMXG00000041936
UniProt:
A0A3B1IYU2
LinkDB
All DBs
Position
19:33957111..33985668
Genome browser
AA seq
526 aa
AA seq
DB search
MSARVWLLAALAACALCGTVENDPLPAALAELVRSGSISSSEELQLLLLSDSVDDDRESS
HANNTNNRLPRSLLAAQPAQQALCKVRTEVMEVTRSMLDRSNANFLLWPPCVEVQRCSGC
CNTKSLKCVPVLTHTRYLQVMKIQYANMRPVYDKAIVSVNDHVECRCQPAPRPAPRRKSP
AHKHEVLRDRSGKPRSKDELHRRDELKHNQRLRLEDLLDDSWLPREKHSELDTPAGFLPT
DGKEIHFGHSDVWSHNKTHHSGHKAEFDGDGRKHNSSSNGTRGGGFLERLTIPLPNHTER
KETDGSLSLLNVTSSEQREQFHKGKSETLKNTTVSEHSLTTQGHVPLHESNLNNQVQRNT
SLNQKHNAPPTRQTHETYGVTPHPTQEKQGHSDDRLKGNETPEPDRTGETEDKKTSSVLL
MEKKALEEEKEELLLLHKLLDEEKHKHLQKTQHSEQEHQKHHQKHQHTYTTTQHTITTSS
APVKVSPPHKPPQPPPQPPRPPPQPPKKRRKHRNRISKAAMRAMLM
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgagggtctggctgctcgcggcgctggcggcgtgcgcgctctgcggcacagtg
gagaatgatcctctccctgcagctctggctgagttggtgagaagcggctccatctcctct
tcagaagaactgcagctgctgctgctttctgactccgtagacgatgatcgagagagttcc
catgccaacaataccaacaaccgactgccaaggagtcttctggctgctcagccagcccag
caggccctgtgtaaagtgaggacagaggtcatggaggtcacccgctccatgctggaccgc
agcaatgccaacttcctgttatggcctccatgtgtagaagttcagagatgctcaggatgc
tgcaacacgaagagtctgaagtgtgttcctgtgctcactcacacacgttacctacaggtg
atgaagatccagtacgcgaacatgcgtccggtttacgataaagccatcgtctcagttaat
gatcatgtggagtgccgctgccagcctgctcctcgtcctgccccccgcaggaagtctcca
gcacacaaacatgaagtactacgagatcgttcagggaaacctcgctctaaagacgagctt
catcgcagagacgaactcaaacacaaccagaggctccggctggaggatctgctggacgac
agctggctgcccagggagaagcactctgagctggatacaccagctggatttctgcccaca
gatgggaaggagatccactttggacattcagatgtctggagtcataataagacacatcat
agtggacataaagctgaatttgacggagacggaaggaaacacaatagcagttccaacggt
acaaggggaggagggttcctggagaggctgaccatccccttgcccaatcacacagagaga
aaagagacagatggaagcttgtccttacttaatgttacaagttcagaacaaagagagcag
tttcacaagggaaaatcagagactctgaagaacaccacagtatctgaacacagcctaacc
actcagggacacgttccactgcacgagtccaacctgaacaatcaagtacaaaggaacacg
tctctcaatcaaaagcacaatgcaccacctacaaggcaaactcatgaaacctatggggtc
actcctcatcccacacaggagaagcaagggcattcagatgacagactgaaaggaaacgag
accccagagccagatagaacaggagagacagaggataagaagaccagttctgtcctgctg
atggagaaaaaggctttagaagaggagaaagaggagctgctgctgctccataaactcctt
gatgaagaaaagcacaaacatctgcagaaaacacaacacagtgaacaagaacatcagaag
catcaccagaaacaccagcatacatacacaactacacagcatacaattaccacatcatct
gctccagttaaagtctctccacctcacaagcctccccagccacctcctcaaccacctcga
ccgcctccgcaacctcccaagaagagaaggaaacaccgtaatcgcatcagcaaggccgcc
atgagggccatgctaatgtag
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