KEGG   Astyanax mexicanus (Mexican tetra): 103033523
Entry
103033523         CDS       T05042                                 
Symbol
si:ch73-22o12.1
Name
(RefSeq) nectin-2 isoform X1
  KO
K06531  poliovirus receptor-related protein 2
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03266  Virion - Herpesvirus
amex04514  Cell adhesion molecule (CAM) interaction
amex04517  IgSF CAM signaling
amex04520  Adherens junction
amex05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    103033523 (si:ch73-22o12.1)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    103033523 (si:ch73-22o12.1)
   04517 IgSF CAM signaling
    103033523 (si:ch73-22o12.1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    103033523 (si:ch73-22o12.1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    103033523 (si:ch73-22o12.1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:amex04515]
    103033523 (si:ch73-22o12.1)
   04090 CD molecules [BR:amex04090]
    103033523 (si:ch73-22o12.1)
Cell adhesion molecules [BR:amex04515]
 Immunoglobulin superfamily
  Nectin family
   103033523 (si:ch73-22o12.1)
CD molecules [BR:amex04090]
 Proteins
  103033523 (si:ch73-22o12.1)
SSDB
Motif
Pfam: V-set Ig_3 C2-set_2 ig Ig_2 I-set Ig_PVRIG GT87 Tcell_CD4_C TM_ErbB1 Podoplanin Syndecan
Other DBs
NCBI-GeneID: 103033523
NCBI-ProteinID: XP_007250915
Ensembl: ENSAMXG00000017895
UniProt: A0A8B9KP40 W5LF49
LinkDB
Position
6:5179031..5301911
AA seq 517 aa
MVWDSSLSSVGLLSSFFFLLIQGSLAQRVKVQPEVVTYPGQTVTLRCQFPEQGQTELTQV
SWIFEKADGTRTNIAVFHPKFGVNYPKSPVTGRVGFTAETPQLDSPTIQITDIKMTDEGR
YICEYATYPSGNEQGVTSLIILAKPENSATAVKVQAGTASVVVASCQSANGRPASTISWV
PGSLNGNASTPTKTDNPDNTVTSKSEYWLVPTPADNDKEISCVVSHRTLPNPETFQMKLV
IEYPPQVQIVGYDNNWYLGRTNAVLTCQAQGNPTPTTVTWRTMSGLMPDTVQVKENKLTV
VKVDETVNATFICEVRNSLGTGRDQVSVMVREAGALAQSSAGVVAGAIIGVLLALLLFGA
LIFVLVSRNRRQQQGYRGNGKAKAEPYDSVARLFGSGGGSGKNGTNGNNGNNNTPIYRGE
PVLSEKAANHNMHPGGVALLETTPTAQDILLSREMDEAERRKFDELEEEDERYDHFTAGG
TILQLRPHEQDMGGSYLDDDMESQRDGSVISRTAVYV
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggtgtgggattcttctctcagctcagttggactcctgagctcgtttttcttccttctc
attcaaggttcgctggcacagcgcgtgaaggtgcagccagaggtggtgacatatccaggc
cagaccgtgaccctgagatgccagtttcctgaacaaggccagactgagctcacacaggtc
tcttggatctttgaaaaggctgatggtacccgaaccaacatcgcagtgttccaccccaag
tttggggtcaattaccccaaatccccggtgactgggcgggtgggttttacggcggagacc
ccccagctggacagtccaaccattcagatcacagatattaagatgacggacgagggaagg
tacatctgtgagtacgccacctaccccagcggcaacgagcagggcgtcaccagcctcatc
atcctagccaagcctgagaactcggccaccgctgtcaaagtgcaggccggcaccgcctcg
gtcgtcgtggcgagctgtcagtcagccaatgggcgtccggcatcgaccatttcctgggtg
ccagggtcgttgaacggcaacgcgtcgaccccaacgaagacggacaaccctgacaacacg
gtgacctccaagagcgagtactggctcgttccgactccggccgacaacgacaaggagatc
agctgcgtggtgtcgcaccggacgctgcccaatccggagacgttccagatgaagctggtg
attgaatatcctcctcaggtccagatcgtgggctatgataataactggtatttgggacgc
accaatgccgtgttgacctgccaggctcaggggaaccccactcccaccacagtgacctgg
agaacgatgtccggtctgatgccggatacggtgcaggtgaaggagaacaaactgaccgtg
gtgaaagtggacgagaccgtgaacgccaccttcatctgcgaggtcaggaacagcctcggc
acggggcgggaccaggtcagcgtgatggtcagggaagccggtgctcttgcccagtccagt
gctggcgtggtggcgggtgccatcatcggtgtcctcctcgccctcctgttgttcggcgcc
ctcatcttcgtccttgtgtcccgcaaccgccggcagcagcagggttaccgcggcaacggc
aaggccaaggcggagccgtacgactcggtggcccgcctctttgggtccggcggcggaagc
ggcaagaacggcaccaacgggaacaacggcaacaacaacacgcccatctaccggggggag
ccggtgctttcggagaaggcggccaaccacaacatgcacccggggggcgtggccctgctg
gagaccactcccaccgcccaggacatcttgctgagcagggagatggatgaggcggagcgc
aggaagttcgacgagctggaggaggaggacgaaaggtacgaccacttcacagcaggcggc
accatcctgcagctccgcccacacgagcaggacatgggcgggagttacctggatgacgac
atggagtcgcaacgtgacggatcggtcatctcgcggactgctgtctacgtgtga

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