Astyanax mexicanus (Mexican tetra): 103036483
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Entry
103036483 CDS
T05042
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04020
Calcium signaling pathway
amex04510
Focal adhesion
amex04518
Integrin signaling
amex04540
Gap junction
amex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103036483 (pdgfrb)
04020 Calcium signaling pathway
103036483 (pdgfrb)
09133 Signaling molecules and interaction
04518 Integrin signaling
103036483 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103036483 (pdgfrb)
04540 Gap junction
103036483 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
103036483 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
amex01001
]
103036483 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
amex04090
]
103036483 (pdgfrb)
Enzymes [BR:
amex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
103036483 (pdgfrb)
Protein kinases [BR:
amex01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
103036483 (pdgfrb)
CD molecules [BR:
amex04090
]
Proteins
103036483 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
C2-set_2
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
103036483
NCBI-ProteinID:
XP_022521307
Ensembl:
ENSAMXG00000017026
LinkDB
All DBs
Position
2:complement(67859038..67930262)
Genome browser
AA seq
1077 aa
AA seq
DB search
MKGARVSFFPLINFITALLLLCSMGSALELNPTLKEIILTPNSSFSITCSGWAPVSWHFK
REEKIPEFRTENRTTTSSILYLENVTWKHTGVYACFENGTDSEEREVAIYVPDPDVWFLE
NEYYMVTKTKQEATIPCLVTDPRINVTLHDRETESLVSGKYSPTVGYTALLDDQTYKCRG
ELNGEEKWSALYYVFSILVPEVLDFHINASKTVLKQGEPLSINCTANGVELVYFSWDFPN
KDVDLEPLTDVLSSVSMRSCLNISNATLAHSGHYACHALEDVGNQQAWVSINITVLEKGF
VALSSFQSPNISAQLHENVRLRVEVEAYPKPNIRWSRDGAVITGDNIINIRQEHETRYIS
TLTLVRIRMEQKGYYTIHVDNEDDSKEMTFDLEVKVPPQITELSDYHLPGKKHAVTCVAE
GVPAPNIQWLSCDSMQRCSNRSLWSPLLSDPESINIVTNATYNDTRKIHQVHSQLIFLHP
QQITVRCLAKSDGGGRARDIRLITSTLFSQVAVLAAVLALVVIAIIFIIILIAVWRKKPR
YEIRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMSRDSLVLGRTLGSGAFGRVVEATAYG
LGNSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVT
EYCRYGDLVDYLHRNKQGFLQHYANKNHLANGTVNQICLDSDVPSGKGYVSFGSVSDGGY
MDMSKEEMTEYVPMQELTDTIKYADIQPSPYESPYQQDIYQEQGHRVDLSLVINDSPVLS
FTDLVGFSFQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDNNYIS
KGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYNALKR
GYRMTKPMHASEEIYEVMRKCWEEKFEKRPEFSFLVQTMGNMLTDAYKKKYNQVNDSFLK
SDHPAVVRTKHGVPSPFPVTLSPSSPNSMFPQFSTPNPCLERNGETETVPYNGYIIPIPD
PKPEEECQEITLPAEIPSSSMSSEAETASLENPSSEAEQEELLKERSKTPDIEESFL
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgaagggagcccgtgtcagctttttcccactgatcaacttcataacagctctcctgctg
ttatgctctatgggttctgcactggagctgaaccccaccctcaaagagatcatcctcacc
cctaactcctccttcagcatcacctgttctgggtgggcaccggtcagctggcactttaaa
cgagaggaaaagatcccagagttccgtacagagaaccggaccaccacctccagcattctg
tatctggagaatgtgacgtggaagcacacaggagtgtatgcgtgctttgagaatgggact
gattcagaagagagggaggtggccatctatgtgcctgacccagatgtgtggtttttggag
aacgagtattacatggtaactaagactaaacaggaagcaaccatcccatgccttgtgacg
gacccccggataaatgtgaccctccatgacagagagacggaaagcctggtgagcggcaag
tattcgcccaccgtagggtacaccgccctgctggacgaccagacgtataaatgcagagga
gaactgaacggagaagagaaatggtctgcactctactacgtcttcagcatcttagttcct
gaagtgctcgacttccacatcaatgcctcaaagactgtgctgaaacagggtgagccgcta
agcattaactgcaccgccaacggagtggagctggtctacttctcctgggacttcccaaac
aaagatgtagatctggagcccttgacggacgtgctgtcatctgtgagcatgcgctcctgc
ttgaacatctccaacgccacactagcgcactctggacactatgcgtgccatgcgttagaa
gatgtgggaaaccagcaggcttgggtcagcatcaacatcactgtgttggagaaaggcttt
gtggcactgagttcatttcagagccccaacatttcagcccagcttcatgagaacgttaga
ctgagagtggaggtggaggcctaccccaaacctaacatccgctggagcagagatggagct
gtcatcactggagacaacatcatcaacataagacaagagcatgaaaccaggtatatcagc
actttaactctggttagaatccgtatggagcagaaaggatactacaccatccacgttgac
aatgaagatgattccaaagagatgacatttgacctagaagttaaggttccccctcaaata
accgagctgtcagactatcacctaccgggaaagaagcatgcagttacctgtgtggccgag
ggtgttcctgctcccaacattcagtggcttagttgtgacagcatgcagagatgcagtaac
agaagcctgtggagccccctcctgtccgacccagaaagcataaacattgtgaccaacgcc
acctacaacgacacgcgcaagatccaccaggtgcacagccagctcatcttcctccacccc
cagcagatcactgtccgctgcctggccaagagtgatgggggaggacgagcacgggacatc
cggctcatcaccagcacactgttctctcaggtggctgttctggctgctgttctggctctg
gttgtcatcgctattatcttcatcattatcctcatcgctgtgtggaggaagaaaccacga
tatgagatcagatggaaggtgattgagtctgtgagtctggacgggcatgagtatatctat
gtggaccccattcacctgccctatgacctggcctgggagatgtcccgagacagcctggtc
ctcggtcgtactctgggatcaggagcctttggaagagtagtggaggccactgcatacgga
ctgggcaattctcaatcctccactaaagttgctgtgaaaatgctcaaatctacagcacgc
aggagtgaaactcaggctctgatgtctgagctgaagatcatgagccatcttggtcctcat
ctcaacattgtcaacctgctgggagcctgcaccaaacaaggcccgctgtacctggtgaca
gagtactgtcgatatggagacctggtggactacctgcacagaaacaagcagggttttcta
cagcactacgctaacaagaaccacctcgccaacggcacagtcaaccaaatctgcctggac
tctgatgtgccttctggaaaaggctacgtgtcgtttggcagtgtgagcgatggtggttac
atggacatgagtaaagaagaaatgactgaatatgtgccaatgcaggagcttactgacact
atcaaatatgcagacatccagccttctccatatgaatccccgtaccagcaggacatctac
caggagcaaggtcacagagtggacctttcactggttatcaatgattctccggtcctgagc
ttcactgacctggtgggcttcagtttccaggtggccaaagggatggagtttctggcctct
aaaaattgtgttcatcgggacctggcggcgaggaacgtgctgatctgtgaggggaagctg
gtaaaaatctgtgactttgggctggccagagacatcatgcatgacaataactacatctcc
aaaggcagcacgttcctgcctctgaagtggatggccccagagagcatcttccataacctc
tacaccacactgagtgacgtctggtcgtatggcatcttgctctgggagatattcacactg
ggaggaactccttatccagatctgccgatgaatgagctgttctataacgccctaaagaga
ggatatcgcatgaccaaacccatgcatgcatcagaagaaatttatgaggtgatgaggaag
tgctgggaggagaagtttgagaagaggcctgagttctcctttctggtccagaccatgggg
aacatgctcacagatgcctataaaaagaagtacaaccaggtcaacgacagcttcctaaag
agtgaccacccagcggtggtgcgcaccaaacatggggtaccctctccattcccagtcacc
ctgtctccctcatcccccaactccatgttccctcaattctccacccctaacccctgcctg
gagcgcaatggggaaacagaaacagtcccttacaacggctacatcatccccatcccggac
cccaagccagaggaagagtgccaggagattaccctgccagcggaaatcccctcgagctcc
atgagttctgaggcggagacagcttctctggagaaccccagcagcgaggcagagcaagag
gagctgctgaaggagcgctccaaaaccccagacatagaggagagcttcctgtga
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integrated database retrieval system
