Astyanax mexicanus (Mexican tetra): 103036483
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Entry
103036483 CDS
T05042
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04020
Calcium signaling pathway
amex04510
Focal adhesion
amex04540
Gap junction
amex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103036483 (pdgfrb)
04020 Calcium signaling pathway
103036483 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103036483 (pdgfrb)
04540 Gap junction
103036483 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
103036483 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
amex01001
]
103036483 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
amex04090
]
103036483 (pdgfrb)
Enzymes [BR:
amex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
103036483 (pdgfrb)
Protein kinases [BR:
amex01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
103036483 (pdgfrb)
CD molecules [BR:
amex04090
]
Proteins
103036483 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
C2-set_2
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
103036483
NCBI-ProteinID:
XP_022521307
Ensembl:
ENSAMXG00000017026
LinkDB
All DBs
Position
2:complement(67859038..67930262)
Genome browser
AA seq
1077 aa
AA seq
DB search
MKGARVSFFPLINFITALLLLCSMGSALELNPTLKEIILTPNSSFSITCSGWAPVSWHFK
REEKIPEFRTENRTTTSSILYLENVTWKHTGVYACFENGTDSEEREVAIYVPDPDVWFLE
NEYYMVTKTKQEATIPCLVTDPRINVTLHDRETESLVSGKYSPTVGYTALLDDQTYKCRG
ELNGEEKWSALYYVFSILVPEVLDFHINASKTVLKQGEPLSINCTANGVELVYFSWDFPN
KDVDLEPLTDVLSSVSMRSCLNISNATLAHSGHYACHALEDVGNQQAWVSINITVLEKGF
VALSSFQSPNISAQLHENVRLRVEVEAYPKPNIRWSRDGAVITGDNIINIRQEHETRYIS
TLTLVRIRMEQKGYYTIHVDNEDDSKEMTFDLEVKVPPQITELSDYHLPGKKHAVTCVAE
GVPAPNIQWLSCDSMQRCSNRSLWSPLLSDPESINIVTNATYNDTRKIHQVHSQLIFLHP
QQITVRCLAKSDGGGRARDIRLITSTLFSQVAVLAAVLALVVIAIIFIIILIAVWRKKPR
YEIRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMSRDSLVLGRTLGSGAFGRVVEATAYG
LGNSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVT
EYCRYGDLVDYLHRNKQGFLQHYANKNHLANGTVNQICLDSDVPSGKGYVSFGSVSDGGY
MDMSKEEMTEYVPMQELTDTIKYADIQPSPYESPYQQDIYQEQGHRVDLSLVINDSPVLS
FTDLVGFSFQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDNNYIS
KGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYNALKR
GYRMTKPMHASEEIYEVMRKCWEEKFEKRPEFSFLVQTMGNMLTDAYKKKYNQVNDSFLK
SDHPAVVRTKHGVPSPFPVTLSPSSPNSMFPQFSTPNPCLERNGETETVPYNGYIIPIPD
PKPEEECQEITLPAEIPSSSMSSEAETASLENPSSEAEQEELLKERSKTPDIEESFL
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgaagggagcccgtgtcagctttttcccactgatcaacttcataacagctctcctgctg
ttatgctctatgggttctgcactggagctgaaccccaccctcaaagagatcatcctcacc
cctaactcctccttcagcatcacctgttctgggtgggcaccggtcagctggcactttaaa
cgagaggaaaagatcccagagttccgtacagagaaccggaccaccacctccagcattctg
tatctggagaatgtgacgtggaagcacacaggagtgtatgcgtgctttgagaatgggact
gattcagaagagagggaggtggccatctatgtgcctgacccagatgtgtggtttttggag
aacgagtattacatggtaactaagactaaacaggaagcaaccatcccatgccttgtgacg
gacccccggataaatgtgaccctccatgacagagagacggaaagcctggtgagcggcaag
tattcgcccaccgtagggtacaccgccctgctggacgaccagacgtataaatgcagagga
gaactgaacggagaagagaaatggtctgcactctactacgtcttcagcatcttagttcct
gaagtgctcgacttccacatcaatgcctcaaagactgtgctgaaacagggtgagccgcta
agcattaactgcaccgccaacggagtggagctggtctacttctcctgggacttcccaaac
aaagatgtagatctggagcccttgacggacgtgctgtcatctgtgagcatgcgctcctgc
ttgaacatctccaacgccacactagcgcactctggacactatgcgtgccatgcgttagaa
gatgtgggaaaccagcaggcttgggtcagcatcaacatcactgtgttggagaaaggcttt
gtggcactgagttcatttcagagccccaacatttcagcccagcttcatgagaacgttaga
ctgagagtggaggtggaggcctaccccaaacctaacatccgctggagcagagatggagct
gtcatcactggagacaacatcatcaacataagacaagagcatgaaaccaggtatatcagc
actttaactctggttagaatccgtatggagcagaaaggatactacaccatccacgttgac
aatgaagatgattccaaagagatgacatttgacctagaagttaaggttccccctcaaata
accgagctgtcagactatcacctaccgggaaagaagcatgcagttacctgtgtggccgag
ggtgttcctgctcccaacattcagtggcttagttgtgacagcatgcagagatgcagtaac
agaagcctgtggagccccctcctgtccgacccagaaagcataaacattgtgaccaacgcc
acctacaacgacacgcgcaagatccaccaggtgcacagccagctcatcttcctccacccc
cagcagatcactgtccgctgcctggccaagagtgatgggggaggacgagcacgggacatc
cggctcatcaccagcacactgttctctcaggtggctgttctggctgctgttctggctctg
gttgtcatcgctattatcttcatcattatcctcatcgctgtgtggaggaagaaaccacga
tatgagatcagatggaaggtgattgagtctgtgagtctggacgggcatgagtatatctat
gtggaccccattcacctgccctatgacctggcctgggagatgtcccgagacagcctggtc
ctcggtcgtactctgggatcaggagcctttggaagagtagtggaggccactgcatacgga
ctgggcaattctcaatcctccactaaagttgctgtgaaaatgctcaaatctacagcacgc
aggagtgaaactcaggctctgatgtctgagctgaagatcatgagccatcttggtcctcat
ctcaacattgtcaacctgctgggagcctgcaccaaacaaggcccgctgtacctggtgaca
gagtactgtcgatatggagacctggtggactacctgcacagaaacaagcagggttttcta
cagcactacgctaacaagaaccacctcgccaacggcacagtcaaccaaatctgcctggac
tctgatgtgccttctggaaaaggctacgtgtcgtttggcagtgtgagcgatggtggttac
atggacatgagtaaagaagaaatgactgaatatgtgccaatgcaggagcttactgacact
atcaaatatgcagacatccagccttctccatatgaatccccgtaccagcaggacatctac
caggagcaaggtcacagagtggacctttcactggttatcaatgattctccggtcctgagc
ttcactgacctggtgggcttcagtttccaggtggccaaagggatggagtttctggcctct
aaaaattgtgttcatcgggacctggcggcgaggaacgtgctgatctgtgaggggaagctg
gtaaaaatctgtgactttgggctggccagagacatcatgcatgacaataactacatctcc
aaaggcagcacgttcctgcctctgaagtggatggccccagagagcatcttccataacctc
tacaccacactgagtgacgtctggtcgtatggcatcttgctctgggagatattcacactg
ggaggaactccttatccagatctgccgatgaatgagctgttctataacgccctaaagaga
ggatatcgcatgaccaaacccatgcatgcatcagaagaaatttatgaggtgatgaggaag
tgctgggaggagaagtttgagaagaggcctgagttctcctttctggtccagaccatgggg
aacatgctcacagatgcctataaaaagaagtacaaccaggtcaacgacagcttcctaaag
agtgaccacccagcggtggtgcgcaccaaacatggggtaccctctccattcccagtcacc
ctgtctccctcatcccccaactccatgttccctcaattctccacccctaacccctgcctg
gagcgcaatggggaaacagaaacagtcccttacaacggctacatcatccccatcccggac
cccaagccagaggaagagtgccaggagattaccctgccagcggaaatcccctcgagctcc
atgagttctgaggcggagacagcttctctggagaaccccagcagcgaggcagagcaagag
gagctgctgaaggagcgctccaaaaccccagacatagaggagagcttcctgtga
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integrated database retrieval system
