Astyanax mexicanus (Mexican tetra): 103037421
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Entry
103037421 CDS
T05042
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00514
Other types of O-glycan biosynthesis
amex04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
103037421 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103037421 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
amex01003
]
103037421 (rfng)
Enzymes [BR:
amex01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
103037421 (rfng)
Glycosyltransferases [BR:
amex01003
]
Glycan extension
O-Glycan
103037421 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
103037421
NCBI-ProteinID:
XP_022525016
Ensembl:
ENSAMXG00000037857
LinkDB
All DBs
Position
15:complement(9278456..9298862)
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AA seq
382 aa
AA seq
DB search
MHLSPVGISKRCFLLSLALSALLLLLILTLQTSQRQGELPQPRPPARPAGAGSGHGLQST
RNATWHKGAGNAKDSSVTRPPPAMAGPQGRLRSQDRDMAHAKSPGSRSREPLELKDIFIA
VKTTRKYHKSRLQLLFQTWVAEAKEQTFIFTDGEDKELKRKAGGNVINTNCSAAHTRQAL
CCKMSVEYDKFIESQKKWFCHVDDDNYIILPSLLQLLSSYSHTQDVYLGRPSLDHPIEAA
ERVKSDGTVSVKFWFATGGAGFCISRGLALKMSPWASLGNFITTAEKIRLPDDCTIGYII
EALLEVPLTHTRLFHSHLENLQRLPTDNVLQQVTLSYGGFENRRNVVSIAGDFSLAEDPS
RFKTVHCLLYPETPWCPHNVRH
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgtcgcccgttggcatcagtaaacgctgcttcctgctctccctggccctctct
gccctgctgctcctgctgatcctcaccctgcaaacatctcagcgccagggggagctcccc
cagcctcgcccccctgccaggcccgccggagcagggagtggacatggactccagagcacc
cgcaatgccacttggcacaaaggtgccggtaatgccaaggattccagcgtcacccggccg
ccccctgctatggctggaccccaggggcggctgaggtcacaggacagggacatggcacat
gctaaatcgcctggctctcgctccagagagcctctagagctaaaggacatttttatcgct
gttaagaccaccagaaagtatcacaagtcacggctgcagctgctctttcagacctgggtg
gcagaggccaaggagcagacgtttatcttcacggatggagaggataaagagctgaagagg
aaggcaggtggcaacgtcatcaacaccaactgctccgccgcccacacccgccaggccctg
tgctgtaagatgtctgtggagtacgacaagttcatcgagtcacagaaaaaatggttttgt
cacgtggatgatgacaactacataatcctccctagtctcctgcagctgctgtcctcctac
tcccatacgcaggacgtgtatctgggccggcccagcctggaccaccctatagaggctgca
gagagggtcaagagcgacggaacggtgtcagtaaagttctggtttgccactggaggtgct
ggattctgcatcagccgaggcctggcgctcaagatgagtccatgggcaagtctggggaac
ttcatcactactgcagagaagatacgtctccctgatgactgcaccatcggttatatcatc
gaggccttgctggaggttcctctgacgcatacacggctcttccactcccacctggagaac
ctgcagaggctgcccactgataacgtcctccaacaggtgaccctcagctacggtggcttt
gagaacaggaggaatgtggtcagcatcgcaggagatttctctttggctgaagatccttct
cggtttaagactgtccactgcttgctttaccctgagactccctggtgtccccacaacgtc
cgtcactga
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