Astyanax mexicanus (Mexican tetra): 103039842
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Entry
103039842 CDS
T05042
Symbol
si:ch1073-335m2.2
Name
(RefSeq) msx2-interacting protein isoform X4
KO
K25100
Msx2-interacting protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
103039842 (si:ch1073-335m2.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103039842 (si:ch1073-335m2.2)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
103039842 (si:ch1073-335m2.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_5
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
103039842
NCBI-ProteinID:
XP_007256745
UniProt:
A0A8T2KS57
LinkDB
All DBs
Position
24:complement(31316222..31337358)
Genome browser
AA seq
3246 aa
AA seq
DB search
MVRETRHLWVGNLPEHVREEKIVEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLDDSSPSSSHGREVAGFSRGTVGPVYGPPV
SLHTREGRYERRLDGSSDSRDRTYEHSPYGHHERSGTFDRPRHYNTDYYRDRTMFASGVA
TSPAVSAISGGFETPEPHFESRIRDPFTLSSSTRRDPYRDDRGRRVDRTYHHRRSRSSHS
SQSRHPSPQRSTGQTPKAPSSPKRAAASPGRGPRSRSRTRSSSSDSVSSTGSTGSGSSDS
NSSSSEGSRARSVQSAATHVTPAPPQMSMDCEEPRRSFGIRVQNLPVRSTDTSLKDGLFH
EFKKYGKVTSVQIHGASEERYGLVFFRQQEDQEKALSVSKGKLFFGMLIEVTAWNGPETE
SENEFRPLDGRIDEFHPKATRTLFIGNLEKTTNYQQLLDVFQRFGEIVDIDIKRVNGIPQ
YAFVQYSDIASVCKAIKKMDGEYLGANRLKLGFGKSMPTTCVWLDGLSSNITEQYLTRHF
CRYGHVVKVVFDRMKGMALVLYNNTDFAQAAVRETKGWKIGGNKIKVDFASQESQMAFYR
SMQASGQDIRDFYELPAERREERRPPYHEFPAERAYYENVRTPGIYTEDPRREYPARSRE
RYTELEHYQGEHYDPRYHEDPREYRDYRDPFEQDIRKYSYIQRERERERERFEADRGRWS
PSHQRRPVSPSASPSPSERVSRDAERRVFRHSSERSGSCSSLSPPQSQFEKTEKSPVDFK
PESLEREMEQQAEADRVSGAEKSKRSRRKEKTDREKGEKIKSRRGKVQSPSIPRSEADRE
PSLDSNSGKIKVPDSDGSERQRHKGENEPSPADPLSRLEPQKGERLDQGKSESVDRDSKG
RSKKHQKSDLGNEGKETLVDSDRLAARKRRFGDPSCKAIRQKRGRLEDESAGVSQSADFG
ANSSLAKETEIDAKIVEKDAHKREHKSKSERISSHFSQREELDPSTRGESQSSSVRLAEH
SDPILESLDSKSQPGISRRFSKDGTPEKDKVRDEYLDIDLSQSYRKQMEQNRKLRQQLQE
PDKPGKTDSTQCLETEDFEHRSLVHEVGKPPQDVTDTSPSSKAKKPEHFDMDMTTKRERV
YRTSRPKSEDAEWNNTHSPRFQHGPHHAEEEYTDVHLINVKEAKELPKTEDNAHPDLDLP
VKRMQASQVSKQSTPLLDEQQRRWESRLKHDLFPDFSRNSEKRRLNRKYLDYGLWPDLEP
GEVRSDSEEDREHKPNSPMPSTSMSFPERHRGDRIPESKLTTSLERNRFYSFALDQTITP
DTKALLERAKSLSSSREDNWSFLDGDSHFASFRSRKDTEKVESTPRPTPSWYMKKKKIRS
ESEDKIDDRKEDPKPEEHERRELFASRFLHSSIFEQDSRRLQHLERKHEDSEHGCPAQQG
QTEVQPDSEPMVLFHDRFMELTRLQQQKLKDQAQQESKKEEIVDVKINSKSEEEEPVQQR
STTEPIIQQTEIKPITPVQPPQTSPVQAINVNPAHETPISPPVLTTKEMSPKQEAANVET
PSPKQLDLPIKEEEKQPEQVFATLPPPQETSETVGSECQEIKPSVNEMKVNPTKEMETIP
DRDAEQLSNSDLQTNDTQMSCEPEPEPQTKPIELQNSPSPMTIDEADKLEKPEPVAKVTE
PPVKEVEAKNADSHIAEEPTSPPPRSRNKKTKASPPTPVAPLISPSTPDKQSTRKSERID
KERHKRSSSPRGESSKATLDKPGKSPIHSPEPEQSVEQNAPPVRARRRNVRSVYATVVEG
ESAPQTGKDVESPRSARKRGTDKDSGQQQQPEPDNPTAPVISRRGRPPKSRRQGEEHPAG
KSERTKMTETKEMDINEPGNNETVTKTGKGKHSQYGHKANQTASVSGQGKKGDKIDKVSE
TNSQKIEPFEMDTDGKNQHECDPSGKSDSKEERKPQISSEPKQEKEKVNQMEKGPESQEK
PESIQEPSSLEKSGKTKATRLNRDSKLLTEDKSLGLKNLRISLDVTEVTVRLQTGENESG
HEASSKKIVPVTSPKDLPLEPKLAKNEMNTKEEDGDTKEDSVTSGKVKDTSEALLSRQME
LEQAVENIAKLTEDPTPLQFKSPTEIQPPLSELPEEPVHETEEEKPANPASETELAAAID
SITSEDVSCGLPQDPVMDTDPDIQTLVPEGKVAESNSGTVQEEPSTTGTPRKGKGRGKAQ
KRAKGPKANVNKKEANKELDAERPSVKPLDSIPEVQTVKESLPPATTVVITPSSKQDLSL
TANVPEVPKATEVPPKEQADLPKPSGPLANKSPTSLKPLSNPYECTSPSLSPTSICLKPS
QQRLPVSPTDRLNQPKETVVLSPSLTPSVQTENPKLHSDPSPHDANTSDLRKILTKPRSI
PITDISPMLGSMHARENDPKGTPHESRHTSISAQPVVRPPASLPSPETKQVFSEKSVISV
IASNATSVISRVCNPPESEEKLSIPMGKPFVEKQPPKQMYQPSMDDSNAHHGPTVGEEGG
NAGRYIVESTSLSTGPTAGLRVNTSEGVVVLSHSGQKIEGRQRISAKISQIPPPSAVDIE
SQQLVSMPPLKQDLYSPSQPATPKGSLPASDSGHSMKSQPNVSSIKQESGLDKLDLYASL
QSGVVKRLQQTSAPSQVMGFHHSEYGMVMKHPKKGEGNEPLNVDSVKPAWVSTISPAISP
HLPSPAGNHVGFIPGTPTDRAPSHIQAKQEPRSPRKTGHPHSPFVPSPIGSSSPKAVSMV
LPTGLSTMSQYVPSVHHSEQSVIMPPHSTHGNLGRMSPHRVGQTIPIGHLSQGEVRVNTP
PISIMNFGIHSESLASAWPPGQQRPTSPQAVGNREMVLKVNPANTRGHEGGEEDARRFHP
ALGRPPAAQLKPESIPAEYRGPIHSGLPLDRFNMSPRDMRMLMHHQQGERPAAEIQHGHI
AEAAPQTSTPTSITSSLSPRAHLLQKNVADKDPLKQSDLKRNTPPPGKDGMMGLRGAVPS
MASPQRVQVIPSGAVPPFSEYSAMYTNLRTVHSQFPESSPLAIAQPPHNITPSQGIQETD
HGQVQTEGKLEHVGHQQVNMVQLLTKYPIVWQGLLALKNDTAAVQLHFVCGNKSLGLRSL
PVPETGAHLRIVQRMRLETPQLEGVARRMTGESDFCLLLAMPCGRDQEDVVNQTQALKSA
FINYLKAKLAAGIINVPNPGSNQPAYVLQIFPPCEFSESHLSRLAPDLLSQISSISPHLM
IVITSV
NT seq
9741 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaaaccagacacctctgggtgggaaatttacccgaacatgttcgagaggag
aaaatcgtggagcattttaaacggtatggccgggtggagagtgtcaaagtcctccgcaag
aggggttcggagggcggtgtcgcagcctttgtggatttcgtcgacatcaaaagtgctcag
aaggctcacaatgcagtcaacaaaatgggagacagagaccttcgcactgattacaatgaa
cctggctcggtccccagtgctgtgcggggactggacgacagctccccctctagcagtcat
gggagggaggttgcaggattctcgaggggtaccgtggggcctgtgtacggacccccggtg
tctctccacaccagagagggacgctatgaacgcagattagacggcagctcagacagtcgg
gacagaacgtacgagcacagtccttatggacaccatgaacgcagtggcactttcgatagg
ccgcggcactacaacacagactattaccgtgaccgcaccatgtttgcctctggggtcgcc
accagcccagcagttagtgcaattagtgggggatttgagaccccagaacctcattttgaa
tcccgaatccgcgaccccttcaccttgtccagctctacacgcagggacccttaccgcgac
gacagggggcggcgcgtcgatcggacttaccaccatcgccgcagccggtcttctcactct
tctcagtcacgacatccttctccacagcggtccaccggacagactcccaaagcccccagc
tctcccaaaagagcagcagcctctccaggccgaggtccgcgctcaaggtcccgaactcga
tcatctagctcggactcagtcagcagcaccggcagcaccggcagtggcagcagtgactca
aacagcagttctagtgagggctctcgggcacgctctgttcagtctgcagccactcatgtt
actcctgcacccccccaaatgtctatggactgtgaggagcctcgtaggagcttcggcatc
agagtacagaaccttcctgtgcgatccacagacacaagcttaaaagatggacttttccac
gagtttaagaaatatgggaaagtgacatctgtgcagatacatggtgcatcagaggaacgt
tatggattagtcttcttcagacaacaagaggaccaggagaaagctcttagtgtatctaaa
ggaaagctcttctttggtatgctgattgaggtgaccgcttggaacggccctgagacagaa
agcgaaaatgagtttcgtcccttggatgggcggatagatgagttccatccaaaggctact
cgaacgttgttcattggaaatttggagaagacaactaattaccagcagctgcttgatgta
tttcagcgctttggcgagatagtggatattgatattaaaagggtcaatggtattcctcag
tatgcctttgtgcaatactccgatattgccagtgtgtgtaaagccatcaagaaaatggat
ggggagtacctgggagccaacagacttaagcttggttttgggaaaagtatgcctacaact
tgcgtatggttagatggactgtcctctaacatcacagagcagtatctaacacgacatttc
tgtcgctatggacatgtggtcaaggttgtgtttgacagaatgaagggaatggcacttgtc
ttgtacaacaacacagattttgctcaagctgctgtaagagagaccaaaggatggaagatt
ggaggcaataaaattaaggttgattttgccagtcaggaaagccaaatggcattctatcgc
tctatgcaggcgtcaggacaggatattcgtgacttttatgaactccctgcagaaagaaga
gaggaacgaagacctccgtatcacgaatttccagcagaaagagcttactatgagaatgtt
cggacacctgggatttatactgaagaccctcgacgagaataccctgctcgcagtcgtgaa
cgttacacagaattggagcattaccagggtgaacattatgatccacgctatcatgaagac
cctcgggaatacagagattatcgggacccttttgaacaggacatcagaaagtatagctac
attcagcgagaacgggagcgagaacgggaacgttttgaagccgaccgtggcagatggagc
ccgtcccatcagcgccgccctgtttcaccttctgcttccccgtcaccatctgaacgtgtt
tcaagagatgcagagaggcgtgtgttcaggcactcgtctgagagaagtggaagctgcagc
tccttatcgcctcctcaatctcagtttgaaaaaacagaaaagtctcctgtggatttcaag
ccagagagtctggagagagaaatggagcagcaggctgaggcagaccgtgtaagtggggca
gagaagagcaaacgtagcaggagaaaggagaaaactgaccgagagaagggagagaagata
aagtcaagaaggggaaaagtgcagtctcctagcatacctcgttctgaagcagacagggag
cccagtttggattctaactctggaaaaataaaggtcccagactctgatggctcagaaaga
cagagacacaaaggtgaaaatgaaccctcccctgctgatcctttgtcccgtcttgagcca
caaaaaggagaaaggcttgaccaaggtaaaagtgagtcagtggaccgggatagcaaagga
agatcaaagaagcaccaaaaatctgaccttggaaatgagggaaaagagactcttgtggat
tctgacaggcttgccgcacgcaaaagacgttttggagaccccagttgcaaagccataagg
cagaaaagaggtcgtcttgaagatgaaagtgctggggttagtcagtctgcagactttgga
gcaaattcttctcttgcaaaggaaacagaaattgatgcaaaaatcgtagaaaaagatgca
cacaagagggaacacaagtccaaatctgaaaggatatcttctcactttagtcaaagggaa
gagttggaccctagtactagaggcgagtctcagagttcatctgtacggctagcagagcat
tctgatcctatcttggagtctttagactcaaaatctcagccaggtatttctagaagattc
tccaaagatggaaccccggaaaaggacaaagttagggacgagtacctggacattgatctt
tctcagagttatcgcaagcagatggagcaaaaccgaaaacttcgtcagcagctgcaagag
cctgataaaccaggaaaaacagattctactcagtgtttggaaacagaagactttgaacac
cgtagcctggtgcatgaagtaggtaagccacctcaggatgtaacagatacttctccatca
agtaaggccaagaaaccagagcattttgacatggatatgactaccaagagagaacgtgta
tacagaacatctcgtccaaaaagtgaagacgccgaatggaacaacacacattctccaagg
tttcagcatggccctcatcatgcagaggaagagtatacagatgttcatctaattaatgtt
aaagaagcaaaagaacttcccaagacagaggataatgctcacccagacctggaccttcca
gttaaacggatgcaggcatctcaggtgtctaagcaaagcaccccactattggatgaacag
caaagacgctgggagagtcgtttaaaacatgacttgtttcctgacttttcaaggaattca
gagaaaagacgtttaaatcggaagtatttggattatggactttggcctgatttggagcct
ggtgaggttcgctcagactctgaggaagatcgagaacacaaaccaaattctccaatgccc
tctacctctatgtccttccctgaacggcatcgtggggacagaataccagaatctaagctt
accacctcactggagagaaatagattttattcctttgctcttgatcaaactatcactcct
gatactaaagctttgttggaacgtgcaaaatctttgtcctcctcaagggaagacaattgg
tctttcctggatggtgactctcattttgctagtttccgtagcagaaaggatacagaaaag
gtagagtcaacaccgcgaccaacaccttcgtggtacatgaagaagaagaaaattcgaagt
gaatctgaggataaaatcgatgacagaaaggaagatcctaagccagaagaacatgaacga
cgagagctttttgcttctcgctttctgcacagttcgatctttgagcaagactcaaggcga
ctccagcatcttgaacgaaagcatgaagattctgaacatggctgtcctgcccagcaaggc
caaactgaggttcaacctgattcagaaccaatggttcttttccatgaccgctttatggaa
ttaacaaggctacagcaacagaagttgaaggaccaggctcagcaagagtcaaagaaggaa
gaaattgtagatgtaaaaattaacagtaaatctgaggaagaggaaccagtccaacaacgc
agtactactgaacctatcatacagcaaactgaaattaaacccatcacccctgtacagcct
ccgcaaacaagtcctgtccaagcgatcaatgtaaaccctgcccacgaaactccaatttcc
ccaccagtcttgacaactaaagagatgtcaccaaaacaagaggctgctaatgttgagact
ccttcacctaagcagcttgatctacctataaaagaagaagaaaagcagcctgaacaggtc
tttgcaactcttccaccgcctcaagaaacatctgagacagttggctcagaatgccaggag
ataaagccttcagtgaatgagatgaaagttaacccaactaaagaaatggaaacaattcct
gatagagatgctgagcagctctccaatagtgatctgcagaccaacgacacacaaatgagc
tgtgaaccagaacccgagccacaaaccaagcccattgagttacagaattctccatcccct
atgactatcgatgaagctgacaaattagaaaagccagagcctgtagccaaagtaacagaa
cctccagttaaagaggttgaagccaagaatgctgacagtcatatagcagaggaaccaacc
tctcctcctccaaggtcaagaaataagaaaacaaaggcctcacctccgacacccgtagcc
cctttgatctcaccaagcacaccagataaacaaagcactcgcaagagtgagcgcattgat
aaggagaggcataagcgttcatcttctccaagaggggagtcatctaaagcaactttagac
aagcctgggaagtctcccatccatagtcctgaacctgagcagagtgtggaacaaaatgca
ccccctgtaagggcaagacgcaggaatgtacgttctgtttatgcgactgtagttgagggt
gaatctgccccacaaactggcaaagatgttgaatcaccacgcagtgcacgcaaacgtggt
acggacaaagatagtgggcaacagcagcaacctgaaccagacaaccctactgcaccagta
atttcaagacggggtcgtccacctaagagtcgacgccaaggagaggaacatccagccgga
aaaagtgagcggacaaaaatgactgagacaaaagagatggatataaatgagcctggaaat
aacgaaacagtcactaaaacgggcaaaggaaaacattctcagtatggacacaaagcaaat
caaactgcttctgtttctggacaaggaaaaaaaggagacaaaatagataaagtatctgag
actaattctcaaaagatagagccctttgaaatggacacagacggcaaaaaccagcatgaa
tgtgatccttccggtaaaagtgattcaaaggaagaacgtaaaccacaaattagttcagaa
ccaaagcaagaaaaagagaaagtgaatcaaatggaaaaaggccctgaaagccaagaaaag
cctgaatctattcaagaaccctcttctttggaaaaaagtggaaaaactaaggcaactcga
ctaaatcgtgattcaaaattactaactgaagataaatctctcggcctcaaaaaccttaga
atcagccttgatgtgacagaagtaactgtaagacttcaaacaggcgagaatgaatctggg
catgaagcatcttctaaaaagattgtgccagttacttcccccaaagacctgccactggaa
cctaaattggcaaagaacgaaatgaatactaaagaagaagatggtgatactaaagaagat
tctgtaaccagtggaaaggtcaaagatacttctgaagcattattgtcgcgtcagatggag
cttgaacaagctgttgagaacattgctaagcttacagaagatcctactccacttcagttt
aaaagcccaacagagatccaaccccctttatctgaacttccagaggagccggttcatgaa
acagaagaagaaaaacctgcaaatcctgctagtgaaactgaacttgcagctgctattgat
tcaatcacatctgaagatgtgtcttgcggtctgccacaagacccagtcatggatacggac
cctgatattcagactttagtcccagagggcaaagttgcagagagtaactctggtaccgtt
caggaggagccctctaccacaggaaccccaagaaaaggcaaaggtagaggaaaagcccag
aaaagagccaaaggcccgaaggccaatgtcaacaagaaggaagcaaacaaagagctagat
gcagagaggccttctgtgaaaccactagactccatacctgaggttcaaacagtcaaagaa
tctttgccaccagctactactgtcgttattacaccttcatccaagcaggatttgagctta
acagctaatgttcctgaagtccctaaagcaacagaggttcctcctaaagaacaagctgat
ctcccaaaaccctctggtccgttagctaataaaagcccaacatccctcaagcctctgtcc
aatccttatgagtgtacatctccctccctgtctcccacaagtatttgcctcaaaccttca
cagcaaagacttccagtctcccccacagatcgattgaatcaacccaaagagactgtcgtt
ctctccccttcattaacaccctcagttcaaacagagaatccaaaattacactccgatccc
tctccacatgatgccaacaccagtgatttgcgtaaaattcttacaaagccaagaagtatt
ccaattacggacattagtccaatgctgggaagcatgcatgcaagggaaaacgatcccaag
ggtacaccacatgagagcaggcacacttccatttcagcccaacctgtggttcgtccacca
gcatctttgccttccccagaaacaaagcaagtctttagtgagaagtcggtaatttctgtc
attgcctctaatgctacgtcagtcatcagtcgggtttgcaatcctcctgaatctgaggag
aagcttagtattccaatgggaaaaccctttgttgagaaacagcctccaaagcagatgtac
cagcccagcatggatgacagcaatgcccatcacggcccaacggttggagaggaaggtgga
aatgcaggtcgctacatagtcgaaagcacgtccctgagtacaggccctactgctggacta
agggtaaatacctcagagggagtggtagtgctgagtcactcaggacaaaaaattgaggga
cgccagcggattagtgccaaaatcagtcagattccacctcctagtgccgtagacatagaa
tctcagcagttggtgtcaatgccaccgctcaagcaagacctttacagcccctctcagcca
gctacacctaagggttccttgcctgcatcagacagtggtcattccatgaagtcacagcct
aatgtctcttctattaagcaagagtctggattagataaattagatctgtatgcttcactt
caaagtggagttgtgaaaaggcttcagcagacatctgcaccttcacaagtaatgggtttc
catcactcagaatacggtatggtgatgaaacatcccaagaaaggagaaggaaatgaacct
ctcaatgtggatagtgtgaaacctgcatgggtgtcaacaataagccctgccataagccct
cacctgccctctccagctggtaatcatgttggattcataccaggaacccctacggataga
gcaccttcacatattcaggctaaacaagaaccacgctccccacggaaaactggacacccc
cattctccctttgtgccttctcctattggctcatcgtctcctaaagctgtttctatggta
ttgcctacaggattatccactatgtctcaatatgtcccaagtgtacaccactctgagcag
tctgtgatcatgccccctcacagcactcatggcaatcttggtagaatgtcacctcaccgt
gtaggtcagaccattcctattggtcacctttctcagggagaggtacgagttaacacaccc
ccaatatcaattatgaacttcggcattcattctgagagccttgcctcagcctggccccct
ggtcaacagcgccccacatctccccaagctgttggcaacagagaaatggttctcaaagtt
aacccagccaataccagaggccatgaaggtggcgaggaggatgcaagacggtttcaccca
gcacttggaagaccaccagcggcacagctgaaaccagagtcaataccagcagaataccgt
gggccgattcacagtggattgccattggaccggttcaacatgtcgccaagagacatgcga
atgctcatgcaccatcagcagggggagcgtccagctgcagagattcaacatggacatatt
gcggaggctgcccctcaaacttcaacacccaccagcattacgtcttcgctctctccacgg
gcacacctgttgcaaaagaatgtagctgacaaagacccattgaaacagtctgatttaaag
aggaacacgccacctcctgggaaagacgggatgatgggacttaggggcgcagtgccttcc
atggcttctcctcagcgggtacaggtgattccctcaggagccgtgccacccttttcggag
tattctgcgatgtacaccaacctacgcactgtccactcgcagtttcctgaaagctcacct
ttagcgattgcccaaccacctcataatatcacgccttcacagggtattcaagaaactgac
cacggccaggtacagactgaaggtaaactggagcatgttggacaccagcaagtcaacatg
gtgcagcttctgacgaaatacccaattgtgtggcaaggcctgctggcattgaagaatgac
accgcagctgtccagttgcattttgtgtgtgggaacaagtctcttggccttcgatcgctt
cctgtgccggagactggtgctcacctccgtattgttcagagaatgaggttagagacgccg
cagctcgagggagtggctcgcagaatgactggtgagagcgacttctgcctcctactggcc
atgccctgtggtcgagatcaggaagatgtcgtaaaccagacgcaagcccttaaatcggcc
ttcatcaattatttaaaggccaagctggctgcaggcatcatcaatgtgcccaatcctgga
tcaaatcagcctgcctacgtgttgcagatttttcctccatgcgagttttcggagagtcat
ctttcacgactcgctccagatctcctcagccagatctccagtatctcccctcatctaatg
attgtcattacctcagtgtga
DBGET
integrated database retrieval system
