Astyanax mexicanus (Mexican tetra): 103040648
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Entry
103040648 CDS
T05042
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04110
Cell cycle
amex04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103040648 (rb1)
04218 Cellular senescence
103040648 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
amex01009
]
103040648 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103040648 (rb1)
Protein phosphatases and associated proteins [BR:
amex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103040648 (rb1)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
103040648 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
HTH_CHD6-9
Motif
Other DBs
NCBI-GeneID:
103040648
NCBI-ProteinID:
XP_022531737
Ensembl:
ENSAMXG00000005363
LinkDB
All DBs
Position
17:complement(7127467..7186088)
Genome browser
AA seq
910 aa
AA seq
DB search
MPPRKRSSGTGSSRRGASSPELRQSGSAISPQQHTEKDSDFVTLCKELFVTNTVCNRAWA
IWTSAAISAEKINNSNRPLWGVCVFISAVDLEEISFTFTQLLKAVGLRLKQFCDLVRKLD
ENVDTISSEVNSTVMKLEKKYDVSLALYQRFGKMCNSIYSVPSEEKRQELLRSSWIMFLL
AKGSALQMEDDLVISFQILLCVLEFCTKRCPSTLLQPLYKSAVSATAQSPPTRTSRRNKA
KPRPPEMDVQLLETLCKESDCSMDEVKNVYQSSFCAFLDSLSLSGSQEFPAVETLSKKYD
ELYHKNKDFDARLFLDDDETLCPGKEEATKVEMMPKKNQSGEENVLVPPQTPIRAAMNSI
QQLRGGLTSASDQPSGNLIVYFKNCTVDPSEEITKRVGQLGQIFCQKFAEAVGQRCEGLG
KTRFTLGVQLHYKVMESMLKSEEKRLSVQNFSKLLNNATFHTSLLASALEVVLATYVGGS
LKNGGSESPETDLCFPWILDVFQLHAFDFYKVIESFIKAEPTLKHDMIEHLGRCEHQIME
SIAWKADSPLFELLRQSREEGPGEQAEPPATLNQPLQHNHTAADLYLSPLRPSRQLPAAA
APPAAPPAAAAAEVDPPAMPLSQPPAPGTKQHRSNSLSLFYKKLYRMAYLRLKMLFSHLL
NSHTELEPIIWTLLQHTLQNEYELMKDRHLDQLMMSAMYAICKVKNVDLRFKTIVTAYKE
LPNTNQETFKRVLIREGQYDSIIVFYNLVFMQKLKTNILQYSSPRPPPLSPIPHIPRSPY
KYPSSPLRVPGGNVYISPLKSNRLTPAAMTPRSRFLVSIGESFGTSDKFQKINQMVSSTD
WSLKRRLDGDATPKPLKKLRFDVDGQDEADGSKSSCESTMIQKLAEITSTRSRMQEQKLK
EEAEKDNPEP
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccagaaagcgcagctccgggaccgggagcagccggaggggcgcctcttccccg
gagctccggcagtccggctccgccatcagcccgcaacagcacacagagaaggattctgac
ttcgtgaccctttgcaaggagctttttgtgaccaacacggtgtgtaacagagcgtgggcc
atctggacgtctgctgccatatcggcagagaaaattaataattcaaacaggccactgtgg
ggagtgtgtgtctttatttctgctgtagacctggaagagatcagcttcacgtttacacaa
ctactgaaagctgttggtctgaggttaaagcagttctgtgacctggtaagaaaactggat
gagaacgtcgacactataagctctgaggtgaactccactgtcatgaagctagagaagaag
tacgacgtgtcgctggcgctctatcaacgatttgggaaaatgtgcaacagtatctattct
gtgcctagtgaagaaaagaggcaggagcttttacgcagtagctggataatgttccttcta
gccaaaggaagtgctctgcagatggaggatgacctagtgatatccttccagattcttctg
tgtgttctggagttctgcaccaagcgctgcccgtccactcttctccagcctctctacaag
tcagcagtaagtgccacagcccagagtcctccaactcggacctcaaggcgtaacaaagcc
aagcctcggccgcctgagatggacgtacagttgctcgagacgctgtgtaaagaaagcgac
tgcagcatggacgaggtaaagaatgtgtaccaaagcagtttctgtgcctttctggactca
ttgagcttgtctggatctcaggagtttcctgcagtagaaactttatccaaaaagtatgat
gagctctaccataaaaacaaggactttgatgccaggctgttcttggatgatgatgagacg
ctctgtccagggaaagaggaagctacaaaagtggagatgatgcccaagaagaatcagtct
ggagaagagaacgttctcgttccaccacagaccccaatccgagctgctatgaattcgata
cagcagctgaggggaggacttacctcagccagtgaccagccctctggcaatcttattgtt
tacttcaagaactgcactgtggacccatcagaagagatcactaagcgggttggacagctg
ggtcagatcttctgccagaagtttgctgaagctgttggtcagcgctgtgaaggcctgggc
aaaacgaggttcactcttggtgtccagctccactacaaagtcatggagtccatgctcaaa
tcagaagagaagaggctctctgtgcagaatttcagtaaactcctcaacaatgctacgttc
catacctcactccttgcctctgcacttgaggttgtgttggcaacctatgttggaggttcc
ctgaagaatggcggcagtgaatcaccagagactgatctgtgcttcccttggatcctggat
gttttccagcttcatgcttttgacttctacaaagtaattgagagcttcatcaaggctgaa
cccaccctcaagcacgacatgatcgagcacttgggccgatgtgagcatcagatcatggag
agcattgcgtggaaagcggattcgcctctgtttgagcttctgagacagtctcgagaggag
ggtccgggtgagcaggccgagcctcctgctactctcaaccagcctctacaacacaaccac
actgctgctgatctgtatctatctccattacggcccagtcgacagctcccagcagcagca
gcaccaccagcagctccaccagcagccgcagcagcagaggtagatcctccagcaatgcct
ctgtcccagcctcctgcccccggaaccaaacagcaccgctccaactccctcagccttttc
tacaagaaactatacaggatggcctacctgcggctgaagatgcttttctctcacctgctg
aactctcacactgagctggagcccatcatctggactctgcttcagcacacactccagaac
gagtatgagctcatgaaggacagacacctggaccagctcatgatgtctgctatgtatgcc
atatgcaaagtgaagaatgtggatttgcgctttaagacaatcgtgactgcgtacaaagag
cttcccaatacaaaccaggagaccttcaagcgtgtgctgatcagagaaggccagtatgac
tccatcatcgttttctataacctggttttcatgcagaagctgaagactaatatcctgcag
tactcctctcctcggccccctcctctatctcctataccccacatcccccgcagcccctac
aaataccccagctctcctctacgggtgcccggcgggaacgtctacatctcccctctgaag
agcaaccgcttaactccagcagccatgactcctcgatctaggttccttgtgtcgatcgga
gagtcatttgggacgtcagacaagttccaaaagatcaatcagatggtcagtagcaccgac
tggtccctgaagaggaggttagatggagacgccacccctaaacccctgaagaaattgcgc
tttgatgtggatggacaggatgaggctgatggaagcaaatcaagttgcgagtctacaatg
atccagaagctggcagagataacttcgactcggagccgcatgcaggaacagaaactgaag
gaggaggctgagaaagacaaccctgagccataa
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