Astyanax mexicanus (Mexican tetra): 103041578
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Entry
103041578 CDS
T05042
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103041578 (bcl11ba)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103041578 (bcl11ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_2
zf-C2H2_15
zf-H2C2_5
DUF3268
Motif
Other DBs
NCBI-GeneID:
103041578
NCBI-ProteinID:
XP_022528992
Ensembl:
ENSAMXG00000042005
LinkDB
All DBs
Position
14:complement(6077662..6176117)
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AA seq
775 aa
AA seq
DB search
MSRRKQGNPQHLSQRESRTPDAEHVDAGMPVAELPPHPHTLLEPSMASSLPPGLGDHDLL
TCGQCQETFPLGEILLFIEHKKKQCQSLTGVHGCYDKTVDRSSPSPPRAELRKVVEPVEI
GIQVTPEEEDERLLTPPKGICPKQESGLPGRDEPSSYTCTTCKQPFPSAWFLLQHVQNTH
GIRIYLESNLSNVSLTPRIAIPPPVGAESIPQSPLTNFLGDNNPFHLLRMPMLREPPPGF
VENRLPNTPPFVSPPPRHHLDPHRLERLSAEEMGLISQHPSAFERVMRLTPMGMETQSMD
FSRRLRELAGNTNSTPPLSPSRGNPMHRLLNPNPFQPNRKSPFLSTPPLPPMPPSSTTPP
QTQDKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHK
SGSITGRSDDGLSATSSPEPGTSDVAGEGMKGRDGDFRGEGLGPDNEEEEEEEEEEELEN
ESRPESNFSMDSELSRNRENGSKPPADEKGLSLSKMVETVGLNSIQQYNNLIVDNRKRLP
FMKRSSDGQRDTGDEDSVVGVMDHQMERPTINGRNCGSGDSFSGLFPRKPTPITSPSLSN
SSNKRIKIEKDLDMPPAPLIPSENVYSQWLVGYAASRHFIKDPFLGFTDSRQSPFATSSE
HSSENGSLRFSTPPGDLLDGGLSGRSGTASGGSTPHLGGGAGPGRPSSKESRRSDTCEYC
GKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQLGLPVMCS
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcgcaagcagggaaaccctcagcatctgtcgcagagagagagcaggacgccg
gacgctgagcatgtggatgcgggaatgcccgtggccgaactgccccctcacccccacacg
ctgctggagcccagcatggccagctcgctgccccccggcctgggggaccacgacttgctg
acctgcggccagtgccaggagacgttccccctgggggagatcctgctcttcatcgagcac
aagaagaagcagtgccagagcctgacgggcgtccacggctgctatgacaaaacggtggac
cgcagcagcccctctccgccgcgggccgagctgaggaaggtggtggaaccggtcgaaatc
ggaatccaggtgacacccgaggaggaagatgagagactgttgacgcctccgaaaggaatt
tgccccaagcaagagagcggcctgccaggtcgagatgaaccttcaagctacacgtgtaca
acatgcaagcagccgtttcccagcgcatggttcctcctgcaacacgtccagaacacgcac
gggatccgtatctacctggagtccaacctgtccaatgtttcgctcaccccgcggatcgcc
atccctcctccagttggtgctgaatccataccccagtcacccctcaccaacttcctgggg
gacaacaaccccttccacctgcttcggatgcccatgctccgggaaccccctcctggcttc
gtggaaaatcgcctaccaaacacgccccccttcgtcagcccgcctccccggcaccactta
gacccccatcgcctggaacgccttagcgcagaagaaatgggtttgatttcccagcatccc
agtgccttcgagagagtgatgcgcctgacgcccatgggcatggagacccagtccatggat
ttctcccgccgcttgcgagaattggcggggaacacaaattccacccctccgctctcaccc
agccgcggcaaccctatgcaccgcctgctcaacccaaaccccttccagcccaaccgcaag
tcacccttcctcagcactcctcctctaccgccgatgcccccgagcagcaccactccacct
cagacgcaagacaagagcaagtcctgcgagttctgcggcaaaaccttcaagttccagagc
aacctgatcgtgcaccggcggagccacacgggagagaagccttacaagtgccagctgtgt
gaccatgcctgctcgcaggccagcaaactcaagcgccacatgaagacccacatgcacaag
tcaggatccatcacggggcgttccgacgatgggctttcggccaccagctcgccggagccg
ggtaccagcgatgttgccggagagggcatgaaaggtcgagacggtgatttccgaggagag
ggactgggtcctgacaacgaggaggaagaggaagaagaggaagaagaggagctggaaaac
gagagcaggcccgaatccaacttcagcatggactcggagctgagccgcaaccgggagaac
ggttccaaaccccccgcggatgagaagggactgtctctgagcaagatggtagaaaccgtg
gggttgaactccatccagcagtacaataacttgatcgtcgacaatcggaaaaggcttccc
ttcatgaagaggagctctgacggacagagggacaccggagacgaggattcggtagtcggg
gtgatggatcaccagatggagcggcccaccatcaacggcaggaactgtggctcgggcgac
tctttctcaggcctgttccctcgcaagcccacgcccatcactagccccagcttgtccaac
tcctccaacaagaggatcaaaattgagaaggacttagacatgcccccggcgccgctgatc
ccttccgaaaacgtctactcccagtggctggtgggctacgcggcttcgcggcacttcatc
aaagaccccttcttgggcttcaccgactccagacaatctcctttcgccacatcctccgag
cattcctcagagaacggcagcctgcggttctccacgccgcccggggacctgctggacggg
ggactctccggccgcagcgggacggccagcgggggaagcaccccccatttaggtgggggt
gcggggccgggccgacccagctccaaagagagccgacgtagcgacacctgcgaatactgc
ggcaaggtgttcaaaaactgcagcaacctgacagtccaccggcgaagccacacgggcgag
aggccctacaagtgcgagctgtgcaactacgcctgcgcccagagcagcaaactcacgcgc
cacatgaagacgcacgggcagctcggacttcctgtgatgtgtagttga
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