Astyanax mexicanus (Mexican tetra): 103042004
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Entry
103042004 CDS
T05042
Symbol
kcnn2
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2 isoform X2
KO
K04943
potassium intermediate/small conductance calcium-activated channel subfamily N member 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103042004 (kcnn2)
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
103042004 (kcnn2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF7310
NPHP3_N
Cortex-I_coil
DALR_1
Motif
Other DBs
NCBI-GeneID:
103042004
NCBI-ProteinID:
XP_022536857
Ensembl:
ENSAMXG00000019146
LinkDB
All DBs
Position
20:20059321..20318699
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AA seq
634 aa
AA seq
DB search
MGSPLRLRPELCYHHHHHQHHHPQQQQQQHHRHGYRGSSQASASPSEHAPSSHASCSRLH
PPPPLPPPPLPPPLHPPPPPPLPPAAAAEMSGCGRYNGGVMRRSLHEFDSESQPLRPACA
ASACASDAAPYPDVSVSSSKPDGGGGGGGGGGGGGGGGGGGSSGQRGSKSGKKKNQNIGQ
KLGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGAYGKESLYSLALKCLISLSTI
ILLGLIIIYHAREIQLFMVDNAADDWRIAMTYERIFFICLEILVCAIHPIPGKYTFTWTA
RLAFYYTSSKTDADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTR
FVMKTLMTICPGTVLLVFTISLWIIAAWTVRACERYHDNQDVTSNFLGAMWLISITFLTI
GYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVAKKLELTKAEKHVHNFMMDTQLTKRV
KNTAANVLRETWLIYKNTKLVRKMDHARVRKHQRKFLQAIHQARKLRSVKMEQRKLNDQA
NSLVDLAKTQNIMYDLISDLNERGEDTEKRIAVLETKLETLLSNLQALPGLISQLISQQH
RDFLEVQLQPYERSQSVSRRRSSSTAPPTSSESS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcccactgcggctgcggccggagctctgctaccatcatcatcatcatcagcat
catcatcctcagcagcagcagcagcagcatcacaggcacgggtaccggggcagcagccag
gcgagcgcgagcccgagcgagcacgcgccctccagccatgcgagctgctcgagactccat
ccacctcctcctcttcctccacctcctcttcctccaccgctccaccctcctcctcctcct
cctctccctcccgctgccgctgcggagatgagcggctgcggccggtacaacggcggcgtg
atgcgccgcagcctgcacgagttcgactccgagtcgcagccgctgaggcccgcgtgcgcc
gcgtccgcctgcgccagcgacgccgcgccgtacccggacgtgtccgtgtcgtcctcgaag
cccgacggcggcgggggaggcggcggaggcggcggagggggcggcgggggaggcggcggc
ggatcgtccggccagagaggctccaaatccggcaagaagaagaaccagaacatcgggcag
aagctcggccaccggagggcgctgttcgagaagcgcaagcgcctcagcgactacgcgctc
atcttcggcatgttcggtatcgtggtgatggtcatagagaccgagctgtcctggggggct
tacggaaaggagtccctgtattcgttagcgctaaaatgcctgataagcctttctacaatc
atccttctgggtttgatcatcatttatcacgccagagagattcagctgttcatggtggac
aacgcggcggacgactggaggatagccatgacctacgagcggatcttcttcatctgcctg
gagatcctggtgtgtgccatccaccccatcccgggcaagtacaccttcacctggacggcg
cgcctggccttctactacacctcctccaagacagacgcggacgtggacattatcctgtcc
atccccatgttcctacggctgtacctgatcgcccgcgtcatgctgctgcacagcaaactg
ttcacggacgcttcctcacgcagcatcggcgcgctcaacaagatcaacttcaacacgcgc
ttcgtcatgaagacgctcatgaccatctgccccggcaccgtgctgctggtcttcaccatt
tctctgtggatcatcgccgcctggactgtgagggcgtgcgaaaggtaccacgataaccaa
gacgtaaccagcaacttcttaggagccatgtggttgatctcaatcacttttctaaccatt
ggatacggggacatggtccccaacacgtactgtggcaaaggggtgtgtctcctcaccggg
attatgggcgccgggtgcactgctttggtggtggccgtggtggcgaaaaaactggaatta
accaaagctgaaaaacatgtacataacttcatgatggacacgcagctgaccaaaagagtg
aaaaacacggctgctaacgttctcagggagacctggctcatctacaagaacaccaagctg
gtgaggaagatggaccacgccagggtcaggaagcaccagaggaaattcctccaagccatt
caccaagctcgaaaattaagaagtgtaaaaatggagcaacggaagctgaatgaccaagca
aactctctagtggacctcgctaagactcagaacatcatgtacgacctgatctcggacctg
aacgagcgcggcgaggacacggagaagaggatcgcggttctggagaccaagctggagacg
ctgctgagcaacctgcaggctctgccgggcctcatcagccagctgatcagccagcagcac
cgcgacttcctggaggtgcagctgcagccgtacgagcgctcgcagtcggtgtctcgtcga
cggtcgtcctccaccgccccgcccacttcctcggagagcagctag
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