KEGG   Astyanax mexicanus (Mexican tetra): 103042330
Entry
103042330         CDS       T05042                                 
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
  KO
K10387  plakophilin 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04382  Cornified envelope formation
amex04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    103042330 (pkp1b)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    103042330 (pkp1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:amex04812]
    103042330 (pkp1b)
Cytoskeleton proteins [BR:amex04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filament-binding proteins
    103042330 (pkp1b)
SSDB
Motif
Pfam: Arm ARM_ARMC5 HEAT ZER1-like_2nd SIL1_FES1_HPBP1_C HSF2BP_C Atx10homo_assoc TOR1L1_N ELMO_ARM ARM_UBP24_USP9X-Y
Other DBs
NCBI-GeneID: 103042330
NCBI-ProteinID: XP_022531291
Ensembl: ENSAMXG00000038111
LinkDB
Position
5:5748738..5791057
AA seq 796 aa
MRNDSVYSSMTLEPLRSALSIGEVGETSLALPSDRSARSAQQRVLEQVSTMKRSKSKYSS
GGGAGGGKAGGTGNLSPTSPQSDSVFYEYKLTPSALNGFINENSMSNGHAKAAKQGQSFV
QRTISTRTSSSQKNLSNSMFPSSPTAMSHSRGGQEGFTAFRSLEMSSPPAVSGGNARWSQ
TFRQTNRQTLERKHSQGALNSNSQIIGNGFGNGIGSVQMTGNGFGSGQVIGSSQMVGNGQ
VVGNGQMFGNGQVIGNGTIHRNSSGSNHQITTSQIISRRPPSTHSNPEGVKASVASRSKS
EIGVNGEARSTDLTVSEAVDCLLSQDENYQLCGASFIQHTTYTDDKAKQEVLKMKGINPL
VSLMNSPNPQIQMTAASALRNLVFKDPANKEEVQRCGGIGQAVQLLKNTESPETQKHVTG
LLWNLSSADNLKPELLRSALPVLTDTVLEPFAAADHSASADQEETFYNATGCLRNLSSGK
LGSRQAMRNCKGLVDSLVSYVQNSVDSGNPDDKSVENCVCILHNLTYQLESESPAIFSKM
NALAGYTNRRANTTDTGPIGCFSSQSRKIQQENHFDYPVMEDNNPKGQSWLIHSQALQSY
LSLLGSSQREATQEACCGALHNLTANKGIVSDVLSQTIVQKLNGLQYISPLLQSSNPELK
NSVTSLLGNLSRTPRLQSMMARQALPQLVRTLNSQGADLSPESDSSIATACHTVNKLLRA
EPEMSKQLLSNTLINSLNDISQNIALPKASKASGVLLHSLWSDKNIQSFLKKQGMNKKSF
VNDITSAAIKSVQVIE
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgaggaacgactcggtgtactccagcatgacgctcgagcccctgcggtccgcgctctct
atcggggaggtcggggaaacgtcgctcgcgctgccgtcagaccgcagcgcgcgctcggcc
cagcagcgcgtgctggagcaggtctccaccatgaagcgcagcaagagcaaatacagcagc
ggcggaggagcaggaggaggaaaagcaggaggaaccgggaacctctcccccaccagtcct
cagagtgacagcgtgttttacgagtacaagctcacacccagcgccctcaacggcttcatc
aacgaaaacagcatgagcaacggacacgctaaagcggctaaacaaggtcagagcttcgta
cagaggaccatcagcaccagaacttcaagttctcagaagaacctgagcaactccatgttt
cccagcagccccacagctatgagtcattcccgaggaggacaggaaggcttcacagctttc
cgcagcctggaaatgagctcccctcctgctgtcagtggtggaaatgcccggtggagccag
accttcagacagacaaacagacaaacattggagaggaagcacagccagggcgcccttaac
agcaatagtcagatcattgggaatggttttgggaatggcattgggagtgttcagatgact
gggaatggctttgggagtggtcaggtcattggaagtagtcagatggttgggaatggtcag
gtcgttgggaacggtcagatgtttgggaacggtcaggtcattgggaatggcaccattcat
agaaacagcagtggtagtaaccaccagatcaccaccagccagatcatcagcagacggcca
ccgtccacacactccaacccagaaggagtgaaggcgtcagtcgctagcagaagcaagagt
gagattggggtaaatggcgaggcacgctcgactgatctcacagtatcagaagcagtggac
tgtctcctcagccaggacgagaattatcagctgtgtggagcttccttcattcagcacacc
acctatactgacgacaaagccaagcaagaggtgctgaagatgaagggaatcaatccattg
gtgtcgctgatgaacagccccaaccctcagatccagatgacggcagcgtccgccctgcgc
aacctggtgttcaaagacccggccaataaggaggaggttcagcgctgcggaggaatcggc
caggccgtgcagctgctgaaaaacacagaatcacccgagactcagaaacacgttacaggt
ctcctgtggaacctgtcctcagcggacaacctgaaaccggagcttctccgcagcgctctg
cccgttctcaccgacaccgtgctggagccgtttgccgccgcagaccacagtgccagcgcc
gatcaggaggagaccttctataatgccacagggtgcttacgaaatctgagctcaggtaaa
ctgggcagcaggcaggccatgcgcaactgcaagggcctggtggactcgctggtgagctac
gtccagaacagcgtggactcaggcaaccctgatgataagtctgtggagaactgtgtgtgt
attctgcacaacctcacctaccagctggagagtgagtcacccgccatcttcagcaagatg
aacgccctggccggttacaccaaccgccgcgccaacaccacagacaccggccctatcggc
tgcttcagcagccagagccgcaagatccagcaggagaaccactttgattatccagtgatg
gaggacaacaatcctaaaggtcagagctggctgatccactcgcaggccctgcagtcgtac
ctgtctctgctcggatcatcccagagagaggccactcaggaagcctgctgtggagctctg
cacaacctcactgccaacaagggcatcgtgtcggatgtgttgagtcagacgatcgttcag
aagctgaacggtctccagtacatctcccccctgcttcagtcctccaaccccgagctgaag
aacagcgtcacatcactgctaggaaacctctccaggacccctcgcctgcagagcatgatg
gctcgtcaggctcttccacagctggttcgaaccctgaactcacagggggctgacctttca
cccgaatccgacagctccatagcaaccgcctgccacactgtaaacaagctcctgagggcg
gagccggagatgtccaagcagttgctaagcaacaccctgatcaactcgttgaatgacatt
agtcaaaacatagccttgcccaaagccagcaaagcatctggagttctcctccacagtctc
tggtccgataagaacatccagagcttcctcaaaaagcaaggaatgaataagaaatcattt
gtgaatgacatcacttcagctgcaatcaagtctgttcaggttattgaatga

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