Astyanax mexicanus (Mexican tetra): 103042330
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Entry
103042330 CDS
T05042
Symbol
pkp1
Name
(RefSeq) LOW QUALITY PROTEIN: plakophilin-1
KO
K10387
plakophilin 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103042330 (pkp1)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
103042330 (pkp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
Atx10homo_assoc
ELMO_ARM
Na_K-ATPase
Motif
Other DBs
NCBI-GeneID:
103042330
NCBI-ProteinID:
XP_022531291
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All DBs
Position
13:23901112..23945888
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AA seq
797 aa
AA seq
DB search
MRNDSVYSSMTLEPLRSALSIGEVGETSLALPSDRSARSAQQRVLEQVSTMKRSKSKYSS
GGGAGGGKAGGTGNLSPTSPQSDSVLYEYKFTPSALNGFINENSMSNGHAKAAKQGQSFV
QRTISTRTSSSQKNLSNSMFPSSPTAMSHSRGGQEGFTAFRSLEMSSPPAVSGGNARWSQ
TFRQTNRQTLERKHSQGALNSNSQIIGNGFGNGIGSVQMTGNGFGSGQVIGSSQMVGNGQ
VVGNGQMFGNGQVIGNGTIHRNSSGSNHQITTSQIISRRPPSTHSNPEGVKASVASRSKS
EIGVNGEARSTDLTVSEAVDCLLSQDENYQLCGASFIQHTTYTDDKAKQEVLKMKGINPL
VSLMNSPNPQIQMTAASALRNLVFKDPANKEEVQRCGGIGQAVQLLKNTESPETQKHVTG
LLWNLSSADNLKPELLRSALPVLTDTVLEPFAAADHSANADQEETFYNATGCLRNLSSGK
LGSRQAMRNCKGLVDSLVSYVQNSVDSGNPDDKSVENCVCILHNLTYQLESESPAIFSKM
NALAGYTNRRANTTDTGPIGCFSSQSRKIQQENHFDYPVMEDNNPKGQSWLIHSQALQSY
LSLLGSSQREATQEACCGALHNLTANKGIVSDVLSQTIVQKLNGLQYISPLLQSSNPELK
NSVTSLLGNLSRTPRLQSMMARQALPQLVRTLNSQGXADLSPESDSSIATACHTVNKLLR
AEPEMSKQLLSNTLINSLNDISQNIALPKASKASGVLLHSLWSDKNIQSFLKKQGMNKKS
FVNDITSAAIKSVQVIE
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacgactcggtgtactccagcatgacgctcgagcccctgcggtccgcgctctct
atcggggaggtcggggaaacgtcgctcgcgctgccgtcagaccgcagcgcgcgctcggcc
cagcagcgcgtgctggagcaggtctccaccatgaagcgcagcaagagcaaatacagcagc
ggcggaggagcaggaggaggaaaagcaggaggaaccgggaacctctcccccaccagtcct
cagagtgacagcgtgttgtacgagtacaagttcacacctagcgccctcaacggcttcatc
aacgaaaacagcatgagcaacggacacgctaaagcggctaaacaaggtcagagcttcgta
cagaggaccatcagcaccagaacttcaagttctcagaagaacctgagcaactccatgttt
cccagcagccccacagctatgagtcattcccgaggaggacaggaaggcttcacagctttc
cgcagcctggaaatgagctcccctcctgctgtcagtggtggaaatgcccggtggagccag
accttcagacagacaaacagacaaacattggagaggaagcacagccagggcgcccttaac
agcaatagtcagatcattgggaatggttttgggaatggcattgggagtgttcagatgact
gggaatggctttgggagtggtcaggtcattggaagtagtcagatggttgggaatggtcag
gtcgttgggaacggtcagatgtttgggaatggtcaggtcattgggaatggcaccattcat
agaaacagcagtggtagtaaccaccagatcaccaccagccagattatcagcagacggcca
ccgtccacacactccaacccagaaggagtgaaggcgtcagtcgctagcagaagcaagagt
gagattggggtaaatggcgaggcacgctcgactgatctcacagtatcagaagcagtggac
tgtctcctcagccaggacgagaattatcagctgtgtggagcttccttcattcagcacacc
acctatactgacgacaaagccaagcaagaggtgctgaagatgaagggaatcaatccattg
gtgtcgctgatgaacagccccaaccctcagatccagatgacggcagcgtccgccctgcgc
aacctggtgttcaaagacccggccaataaggaggaggttcagcgctgcggaggaatcggc
caggccgtgcagctgctgaaaaacacagaatcacccgagactcagaaacacgttacaggt
ctcctgtggaacctgtcctcagcggacaacctgaaaccggagcttctccgcagcgctctg
cccgttctcaccgacaccgtgctggagccgtttgccgccgcagaccacagtgccaacgcc
gatcaggaggagaccttctataatgccacagggtgcttacgaaatctgagctcaggtaaa
ctgggcagcaggcaggccatgcgcaactgcaagggcctggtggactcgctggtgagctac
gtccagaacagcgtggactcaggcaaccctgatgataagtctgtggagaactgtgtgtgt
attctgcacaacctcacctaccagctggagagtgagtcacccgccatcttcagcaagatg
aacgccctggccggttacaccaaccgccgcgccaacaccacagacaccggccctatcggc
tgcttcagcagccagagccgcaagatccagcaggagaaccactttgattatccagtgatg
gaggacaacaatcctaaaggtcagagctggctgatccactcgcaggccctgcagtcgtac
ctgtctctgctcggatcatcccagagagaggccactcaggaagcctgctgtggagctctg
cacaacctcactgccaacaagggcatcgtgtcggatgtgttgagtcagacgatcgttcag
aagctgaacggtctccagtacatctcccccctgcttcagtcctccaaccccgagctgaag
aacagcgtcacatcactgctaggaaacctctccaggacccctcgcctgcagagcatgatg
gctcgtcaggctcttccacagctggttcgaaccctgaactcacaggggnnggctgacctt
tcacccgaatccgacagctccatagcaaccgcctgccacactgtaaacaagctcctgagg
gcggagccggagatgtccaagcagttgctaagcaacaccctgatcaactcgttgaatgac
attagtcaaaacatagccttgcccaaagccagcaaagcatctggagttctcctccacagt
ctctggtccgataagaacatccagagcttcctcaaaaagcaaggaatgaataagaaatca
tttgtgaatgacatcacttcagctgcaatcaagtctgttcaggttattgaatga
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