Astyanax mexicanus (Mexican tetra): 103042817
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Entry
103042817 CDS
T05042
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00280
Valine, leucine and isoleucine degradation
amex00650
Butanoate metabolism
amex00900
Terpenoid backbone biosynthesis
amex01100
Metabolic pathways
amex03320
PPAR signaling pathway
Module
amex_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
103042817 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
103042817 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
103042817 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
103042817 (hmgcs1)
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
103042817 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
PS_Dcarbxylase
Motif
Other DBs
NCBI-GeneID:
103042817
NCBI-ProteinID:
XP_007255347
Ensembl:
ENSAMXG00000039120
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All DBs
Position
20:complement(27078557..27093156)
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AA seq
526 aa
AA seq
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MIVSPFTMPGSLPANYVAAWPKDVGIIAMEVYIPSQYVDQTELEEFDGVGAGKYTIGLGQ
AQMGFCSDREDINSLCLTVVQQLMERNCLSYDSVGRLEVGTETIIDKSKSVKTVLMQLFE
ESGNTDVEGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGG
AGAVAMLVGPNAPLAFDRGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCY
SVYRNKIQAQWQREGLERNFNLDEFGYMVFHSPYCKLVQKSLARLLLNDFLYHPSPNTES
GPFSGLEAFRDVKIEDTYFDRDVEKAFMKASAEMFEQKTKASLLISNQNGNMYTPSVYGC
LASVLAQHTPQQVAGQRIGVFSYGSGFAATLYSIKVTQDATPGSALDKLVSSLSDLKARL
DSRRKVAPGVFADNMKLREDTHHLANYIPQGPVDELFPGTWYLTRVDEKHRRYYARRSLD
EDRPLEAGLADSVTEAEHIPSPVKKMPRIPASTAAPEAVAVSNGNH
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagtccattcaccatgcctggatctctacctgctaactatgtggctgcttgg
cccaaagatgtgggcatcatcgctatggaggtctacattccctctcagtatgtggaccag
acagaactggaggagtttgacggcgtcggggccggaaagtacaccatcgggctcggccag
gcgcaaatgggcttttgctcagaccgcgaggacattaactctctgtgcctgaccgtggtg
cagcagcttatggagagaaactgcctgtcgtatgacagcgtggggagactagaggtgggc
acagagaccatcatcgacaaatccaagtctgtgaagactgtactaatgcagctgtttgag
gagtcgggaaatacagatgtggagggcatcgacacaactaatgcctgctatggaggaact
gctgcacttttcaatgcagtcaactgggtggagtccagctcttgggatggtcgctacgct
ctggtcgtggcgggagatattgctgtgtatgccacaggcagtgccaggcctaccggtggg
gctggagcagtggccatgttggttgggcccaatgcccctctggcatttgatcgaggtcta
cgaggcacccacatgcagcatgcctatgatttctataagcccgatatggtatctgaatac
cccgtggtggatggaaagctctccatccagtgctacctcagtgcattagacagatgctac
tcagtctaccgcaataagattcaagcacaatggcaaagagagggacttgagaggaatttc
aatctggatgaatttggctacatggtcttccactctccttactgtaaactggtccagaaa
tctctggctcgcctcctgctcaacgatttcctgtatcatcccagtcccaacacagagagc
ggcccgttcagtggtctggaagccttcagagatgtgaagattgaggacacttattttgac
cgtgacgtggagaaggccttcatgaaagccagtgcggagatgtttgagcagaaaaccaag
gcttcactcctcatatccaaccagaatggcaatatgtatacgccgtctgtgtatggctgc
ctggcttcagttctagcacaacatactccacagcaggtggcaggacagagaattggcgtg
ttttcttatggatcaggattcgctgcaactctctactctattaaagtcacacaggatgct
acacctggttctgcgctggataaacttgtttccagtctgtcagatctgaaggctcgactg
gactccaggaggaaagttgcacctggtgtctttgcagacaacatgaagcttagagaagac
actcatcacttagcaaactacatcccccagggtcctgtggatgagctctttccaggaacg
tggtacttgacccgtgtggatgagaaacaccgcaggtattacgccagacgctcccttgac
gaggacagaccactggaagcaggactggctgattctgtaactgaagcagagcacatcccc
agcccagtaaagaagatgccccgcatcccagcctccacagctgcccctgaggcggttgct
gttagtaacgggaaccactaa
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