Astyanax mexicanus (Mexican tetra): 103043840
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Entry
103043840 CDS
T05042
Symbol
ldlrb
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03272
Virion - Hepatitis viruses
amex04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
103043840 (ldlrb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103043840 (ldlrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103043840 (ldlrb)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
103043840 (ldlrb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Vgb_lyase
EGF_3
hEGF
Motif
Other DBs
NCBI-GeneID:
103043840
NCBI-ProteinID:
XP_007231365
Ensembl:
ENSAMXG00000011312
UniProt:
A0A8B9J6J0
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All DBs
Position
5:complement(31920180..31945693)
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AA seq
860 aa
AA seq
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MLQRWIFSCALLGLACLTLSRAAATCSERQFQCSNGKCITTRWVCDDMDDCGDGSDELLI
TCSKKICQPSEFSCGDRLNQCVPSRWLCDGKADCENGRDEEDCVLKNCTEDEFRCANGQC
ISASFVCDDESDCSDGSDEASCAPPTCTAGSFQCNNSVCVPQLWACDGDADCADGSDEWP
QNCGQQKAPPTPCHEQEFHCNSGECIHGMWRCDGGFDCMDHSDEANCSAPTCRPDEFQCA
DGGCIPGIRQCDGEFHCRDMSDENDCATVSKCEGPNTFHCRSGECISLDKVCNKQRDCRD
WSDEPLKECNTNECLVNNGGCSHTCNDLKIGYECLCPAGYRLVDNKRCEDIDECADPDTC
SQVCVNLEGSFKCECEEGYEMDLMTKECKAVAGNVPYLYFTNRHEVRKMTLDKSEYTCLI
PRLKNVVALDMDKSGQRIFWSDLFHKKIYSTPVDQAADSSHHTTVIDGHISAPEGLAVDW
IHGNIYWTDSIFGLISVATTDGSKRKTLIRDELKKPRAIVVDPERNFMYWTDWGHPARIE
KSGLNGADRTALVTDNIVWPNGITLDMVNQRLYWVDSKLHTLSSIGVNGGLRHTLIIDEG
TLAHPLSLTVFEEKVFWTDVSSNSIMSANRLTGKDIVKVAENLVSPEDIVLYHDLKQPNG
TNWCEEGKQVNGGCEYLCLPAPRINPHSPKYTCACPDHMVLGPDMRKCVEVDQKAKGAAT
TAVIPPRVPNSRTTPKPPARPDPTQQKPVTKGAAAGRKNLPDEINREGSNDGYVAVPSQS
QNHVALYVILPIAAMCLTVFGAVLLWRHWRLKNTNTIHFENPVYQKTTEDKVHICRSNSQ
DGYIYPSHQMLSLDDEEDMA
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaacgctggattttcagctgtgcgcttctggggctcgcctgcttgactttatca
cgtgcagcagctacctgcagcgagcggcagttccagtgctcaaatgggaaatgcattacg
acacgctgggtgtgtgacgacatggacgactgtggggatggatctgatgagctgctcatc
acatgcagcaagaagatatgtcagccgtcagagttcagctgtggtgacaggctgaaccaa
tgcgtgccctcccggtggctctgtgacggaaaggcagactgtgagaacggacgggatgag
gaagactgtgttctgaaaaactgcacggaagacgagttccgatgtgccaacggtcagtgt
atctctgcctcgtttgtgtgtgatgatgagtcggactgctcggatggcagcgatgaggcc
tcctgtgcaccgcccacctgcaccgctggctccttccagtgcaacaactctgtgtgcgtg
ccccagctgtgggcgtgtgacggggacgccgactgtgcagatggttcggacgagtggccc
cagaactgtggacagcaaaaggccccacccacaccctgccatgagcaggagttccactgc
aacagcggggagtgtatccatggcatgtggcgctgtgacgggggcttcgactgcatggac
cactcagacgaggccaactgcagtgcgcccacctgtcggccagatgagtttcagtgtgct
gacggcggctgtattccaggcatccggcagtgtgacggcgagtttcactgcagggacatg
agcgatgagaatgactgtgccactgtgagtaagtgcgagggtcccaacacgtttcactgt
cgcagtggagagtgcatcagcttggacaaggtgtgcaacaagcagcgcgactgcagggac
tggtctgatgagcccctcaaagagtgcaacaccaacgagtgcctagtaaataacggaggc
tgctctcacacctgtaacgacctgaagatcggctatgagtgtctctgccctgcaggatac
aggctggtggacaacaaacgctgtgaagacattgatgagtgtgcagaccctgacacgtgc
tctcaggtgtgtgtgaatctggagggcagcttcaagtgtgagtgcgaagagggctatgag
atggacctcatgaccaaagagtgcaaggctgtggcaggtaatgttccatatctgtacttc
accaatcgtcatgaggtgaggaagatgacgctggataagagtgagtacacgtgtctgatc
ccccgactgaagaacgtggtggcacttgacatggacaagtctggtcagaggattttctgg
tccgatctcttccacaaaaagatttacagcactcctgtggaccaggctgctgactcctcc
catcacaccacagtgattgacggccatatctccgcccctgagggattggctgttgactgg
atccatggcaacatctactggactgacagcatctttggactcatctccgtggcaaccaca
gacggatcgaagcgcaaaactcttatcagagatgagctgaaaaagccgcgggccattgtt
gtagatccagagcgcaacttcatgtactggacagactggggacatcctgccaggattgag
aagagtggtttgaatggcgccgaccgcacagctctggtgactgacaatattgtctggccc
aacggcatcacactggacatggtgaaccagcgtctctactgggtggactccaagctgcac
acactctccagcatcggggtcaacggcggtctgcgtcacacactcatcatagacgaggga
accctggcccaccctctctcactgacagtgtttgaggagaaggttttctggacggacgtc
tccagcaacagcatcatgagcgcgaaccgtctgacgggaaaagacattgtgaaggtggcg
gagaacctggtgtctcctgaggacattgtgctgtaccacgacctcaaacagcccaatggt
acaaactggtgtgaggagggtaagcaggtgaatggaggctgtgagtatctgtgtcttcca
gctccacgcattaacccgcactcacccaagtacacctgcgcctgccccgatcacatggtc
ctgggcccagatatgaggaaatgtgtggaagttgatcagaaagcaaaaggagcagcaact
acagctgtgattccaccccgagtcccaaacagcagaactacacctaaaccacctgctaga
cctgaccccacccagcaaaaacctgttaccaaaggagctgctgctggaagaaagaacctt
ccagatgaaataaacagagaaggttcaaatgatggctatgttgcagtccccagccagtcc
cagaaccatgttgctctctacgtgatactgccaatagctgccatgtgcctaactgtgttt
ggcgccgtgttgctgtggcggcactggagactaaagaacaccaacaccattcattttgag
aatcctgtctatcagaaaacaacagaggacaaggtgcacatctgcaggagcaacagccaa
gacggatacatttacccctcgcatcagatgctaagtctggatgacgaggaggacatggcg
tga
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