KEGG   Astyanax mexicanus (Mexican tetra): 103043840
Entry
103043840         CDS       T05042                                 
Symbol
ldlrb
Name
(RefSeq) low-density lipoprotein receptor
  KO
K12473  low-density lipoprotein receptor
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03272  Virion - Hepatitis viruses
amex04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    103043840 (ldlrb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103043840 (ldlrb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103043840 (ldlrb)
Membrane trafficking [BR:amex04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    103043840 (ldlrb)
SSDB
Motif
Pfam: Ldl_recept_a Ldl_recept_b FXa_inhibition cEGF EGF_CA SGL EGF Vgb_lyase EGF_3 hEGF
Other DBs
NCBI-GeneID: 103043840
NCBI-ProteinID: XP_007231365
Ensembl: ENSAMXG00000011312
UniProt: A0A8B9J6J0
LinkDB
Position
5:complement(31920180..31945693)
AA seq 860 aa
MLQRWIFSCALLGLACLTLSRAAATCSERQFQCSNGKCITTRWVCDDMDDCGDGSDELLI
TCSKKICQPSEFSCGDRLNQCVPSRWLCDGKADCENGRDEEDCVLKNCTEDEFRCANGQC
ISASFVCDDESDCSDGSDEASCAPPTCTAGSFQCNNSVCVPQLWACDGDADCADGSDEWP
QNCGQQKAPPTPCHEQEFHCNSGECIHGMWRCDGGFDCMDHSDEANCSAPTCRPDEFQCA
DGGCIPGIRQCDGEFHCRDMSDENDCATVSKCEGPNTFHCRSGECISLDKVCNKQRDCRD
WSDEPLKECNTNECLVNNGGCSHTCNDLKIGYECLCPAGYRLVDNKRCEDIDECADPDTC
SQVCVNLEGSFKCECEEGYEMDLMTKECKAVAGNVPYLYFTNRHEVRKMTLDKSEYTCLI
PRLKNVVALDMDKSGQRIFWSDLFHKKIYSTPVDQAADSSHHTTVIDGHISAPEGLAVDW
IHGNIYWTDSIFGLISVATTDGSKRKTLIRDELKKPRAIVVDPERNFMYWTDWGHPARIE
KSGLNGADRTALVTDNIVWPNGITLDMVNQRLYWVDSKLHTLSSIGVNGGLRHTLIIDEG
TLAHPLSLTVFEEKVFWTDVSSNSIMSANRLTGKDIVKVAENLVSPEDIVLYHDLKQPNG
TNWCEEGKQVNGGCEYLCLPAPRINPHSPKYTCACPDHMVLGPDMRKCVEVDQKAKGAAT
TAVIPPRVPNSRTTPKPPARPDPTQQKPVTKGAAAGRKNLPDEINREGSNDGYVAVPSQS
QNHVALYVILPIAAMCLTVFGAVLLWRHWRLKNTNTIHFENPVYQKTTEDKVHICRSNSQ
DGYIYPSHQMLSLDDEEDMA
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgctgcaacgctggattttcagctgtgcgcttctggggctcgcctgcttgactttatca
cgtgcagcagctacctgcagcgagcggcagttccagtgctcaaatgggaaatgcattacg
acacgctgggtgtgtgacgacatggacgactgtggggatggatctgatgagctgctcatc
acatgcagcaagaagatatgtcagccgtcagagttcagctgtggtgacaggctgaaccaa
tgcgtgccctcccggtggctctgtgacggaaaggcagactgtgagaacggacgggatgag
gaagactgtgttctgaaaaactgcacggaagacgagttccgatgtgccaacggtcagtgt
atctctgcctcgtttgtgtgtgatgatgagtcggactgctcggatggcagcgatgaggcc
tcctgtgcaccgcccacctgcaccgctggctccttccagtgcaacaactctgtgtgcgtg
ccccagctgtgggcgtgtgacggggacgccgactgtgcagatggttcggacgagtggccc
cagaactgtggacagcaaaaggccccacccacaccctgccatgagcaggagttccactgc
aacagcggggagtgtatccatggcatgtggcgctgtgacgggggcttcgactgcatggac
cactcagacgaggccaactgcagtgcgcccacctgtcggccagatgagtttcagtgtgct
gacggcggctgtattccaggcatccggcagtgtgacggcgagtttcactgcagggacatg
agcgatgagaatgactgtgccactgtgagtaagtgcgagggtcccaacacgtttcactgt
cgcagtggagagtgcatcagcttggacaaggtgtgcaacaagcagcgcgactgcagggac
tggtctgatgagcccctcaaagagtgcaacaccaacgagtgcctagtaaataacggaggc
tgctctcacacctgtaacgacctgaagatcggctatgagtgtctctgccctgcaggatac
aggctggtggacaacaaacgctgtgaagacattgatgagtgtgcagaccctgacacgtgc
tctcaggtgtgtgtgaatctggagggcagcttcaagtgtgagtgcgaagagggctatgag
atggacctcatgaccaaagagtgcaaggctgtggcaggtaatgttccatatctgtacttc
accaatcgtcatgaggtgaggaagatgacgctggataagagtgagtacacgtgtctgatc
ccccgactgaagaacgtggtggcacttgacatggacaagtctggtcagaggattttctgg
tccgatctcttccacaaaaagatttacagcactcctgtggaccaggctgctgactcctcc
catcacaccacagtgattgacggccatatctccgcccctgagggattggctgttgactgg
atccatggcaacatctactggactgacagcatctttggactcatctccgtggcaaccaca
gacggatcgaagcgcaaaactcttatcagagatgagctgaaaaagccgcgggccattgtt
gtagatccagagcgcaacttcatgtactggacagactggggacatcctgccaggattgag
aagagtggtttgaatggcgccgaccgcacagctctggtgactgacaatattgtctggccc
aacggcatcacactggacatggtgaaccagcgtctctactgggtggactccaagctgcac
acactctccagcatcggggtcaacggcggtctgcgtcacacactcatcatagacgaggga
accctggcccaccctctctcactgacagtgtttgaggagaaggttttctggacggacgtc
tccagcaacagcatcatgagcgcgaaccgtctgacgggaaaagacattgtgaaggtggcg
gagaacctggtgtctcctgaggacattgtgctgtaccacgacctcaaacagcccaatggt
acaaactggtgtgaggagggtaagcaggtgaatggaggctgtgagtatctgtgtcttcca
gctccacgcattaacccgcactcacccaagtacacctgcgcctgccccgatcacatggtc
ctgggcccagatatgaggaaatgtgtggaagttgatcagaaagcaaaaggagcagcaact
acagctgtgattccaccccgagtcccaaacagcagaactacacctaaaccacctgctaga
cctgaccccacccagcaaaaacctgttaccaaaggagctgctgctggaagaaagaacctt
ccagatgaaataaacagagaaggttcaaatgatggctatgttgcagtccccagccagtcc
cagaaccatgttgctctctacgtgatactgccaatagctgccatgtgcctaactgtgttt
ggcgccgtgttgctgtggcggcactggagactaaagaacaccaacaccattcattttgag
aatcctgtctatcagaaaacaacagaggacaaggtgcacatctgcaggagcaacagccaa
gacggatacatttacccctcgcatcagatgctaagtctggatgacgaggaggacatggcg
tga

DBGET integrated database retrieval system