Astyanax mexicanus (Mexican tetra): 103043944
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Entry
103043944 CDS
T05042
Symbol
tdg.1
Name
(RefSeq) thymine DNA glycosylase, tandem duplicate 1 isoform X2
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103043944 (tdg.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
103043944 (tdg.1)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
103043944 (tdg.1)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
103043944 (tdg.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
INO80_Ies4
DUF4407
Motif
Other DBs
NCBI-GeneID:
103043944
NCBI-ProteinID:
XP_007252954
Ensembl:
ENSAMXG00000029149
UniProt:
A0A8B9LGH3
A0A3B1IYW3
LinkDB
All DBs
Position
10:35109444..35115734
Genome browser
AA seq
443 aa
AA seq
DB search
MEERSYGSLPPHAPSDYVQHWVQSAQQHLQALHAQYSHMANGNAGQYMEGPREDGVMAQM
PLQQQMPAQLEAGVPEQAKAPAKGKRGRPANKEPKPKAEPKPKAKPGPKPKKAKLDKDGQ
PIEGAQEKIDESFKKVKRKIDRFKGMSEEEVMKKTLPDILTPNLDYVIIGINPGLMAAYI
GRWFPGPGNHFWKCLFLSGFTDQLLNHMHDHTLPEKYGIGFTNMVARATPGSKDLSSKEL
REGGKILVEKIKQFKPLIAVFNGKCIYEMFCREIFGKKPKTLEFGLQPHKIPDSETALYL
MPSSSARCAQFPRAQDKVHFYIKLRELRDQLKGVAKPQEVEEVNYSFDLGLAKEDAKRMA
IKEEQYDPGYEAAFGGAYGEPGVEEGQSNGHCPFSSGQAETSEKEPRNQNKEGQVPGGQW
MNESFTDKIPDIGSSSQAPAGAV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaggagttatggatctttgcccccccatgccccctcggattatgtccagcac
tgggtacagtcagcgcaacaacatctccaggcacttcacgctcagtattctcatatggct
aatggaaatgctggccagtacatggagggaccaagagaagatggggtcatggcacagatg
cctctgcagcagcagatgcctgcccagctagaggctggtgttccagagcaagccaaagct
cctgctaaagggaagaggggcagacctgcaaacaaagagcccaaacctaaagcagagcct
aaacccaaggctaaacctggccccaagcctaagaaagccaagctagacaaagatggccag
ccaattgaaggtgctcaagagaagattgatgaatccttcaagaaagtaaagaggaaaata
gatcgcttcaagggcatgtcagaagaggaggtcatgaaaaagactctgccggacatcctt
acgcccaacttggattatgtgattattggaatcaatccaggattaatggcagcctatatt
ggaagatggttccctggacctggaaatcacttttggaagtgcttgttcctgtctgggttc
actgaccagctgctgaaccatatgcatgaccacactcttcctgagaaatacggcattggc
ttcacaaacatggtagccagagcaacacccggaagcaaagatctctcaagtaaagagctt
cgagaaggtggcaaaattttagtggagaagataaagcagttcaagccactcatagctgtg
ttcaatggaaaatgtatttatgaaatgttctgtagagaaatatttgggaaaaagccaaaa
actctggaatttggcttacagcctcacaagattccagactctgaaacggcattgtacctg
atgccctcgtccagtgctcgctgtgcccagttcccccgagctcaggataaagtgcacttc
tacatcaagctcagggaacttcgagaccaactgaagggagttgctaaacctcaagaggtg
gaggaagtcaattattccttcgatcttggcctggctaaagaggatgccaagaggatggcc
atcaaggaagagcagtatgatcctggctacgaagctgcctttggaggggcgtatggagaa
cctggagttgaggaaggacagagcaatggacattgtccgttctcttctggacaggcagaa
acatcggagaaggaacccagaaatcagaacaaggagggtcaggttccagggggacagtgg
atgaacgagtctttcactgacaagattccggacattggaagctcttcacaagcgcctgca
ggggctgtatga
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integrated database retrieval system
