Astyanax mexicanus (Mexican tetra): 103044147
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Entry
103044147 CDS
T05042
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04010
MAPK signaling pathway
amex04260
Cardiac muscle contraction
amex04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103044147
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
103044147
04261 Adrenergic signaling in cardiomyocytes
103044147
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103044147
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
103044147
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
DUF2201
dCache_2
Motif
Other DBs
NCBI-GeneID:
103044147
NCBI-ProteinID:
XP_049339384
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All DBs
Position
9:complement(16369840..16542077)
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AA seq
1093 aa
AA seq
DB search
MNSHTSTLLLLTLLHALHTVQPSQFPSSLMIKEWVDQMQQELVNLADMASAGKSLAQIYM
DNQNLFTLEPNNAGKLVEDAARNIENFLKKRAKALEALAAAAETSQMEHQWKDEFADEEI
VYFNAKDNLDANETQEGRIHRIRPDFKEDPSFKNRLISYNHSAVHIPTDIYDGSTIVLNE
LNWTEALEDVFKKNREEDPTLLWQVFGSATGLARYYPASPWKDARKTPSKIDLYDVRRRP
WYVQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVNFNTRVNNTA
CFDHLVQANVRNKKILKDGVQNITAKGITNYTKGFEFAFKQLSDPNVTRANCNKIIMLFT
DGGEERAQEIFSRYNPKKKVRIFTFSVGQHNYDTGPIQWMACANKGYFYEIPSIGAIRIN
TQEYLDVLGRPMVLADAKQVQWTNVYLDALELGLVITGTLPVFNKTSSEDGSRKQHQNQL
ILGVMGVDVSLDDIKRLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKKRMRNRHIRLKNK
YAITYHEEPVTLDFLDAELENDIKVQIRTMMIDRVPGNKTIDTLVKTQDERYIDRGVRTY
TWAPVNGTDYSLALVLPEYNMHYIEASLGDLNQAKFFETMQVEKFEENGYTFIAPREYCQ
DLKITSNNTQFLMDFNQYIDKRTPSDPMCNLTLVNRLLLDAGLTAELVTLWKKQPIEGVL
ARFVATDGGITRVYPKSGGEEWTENAETFDSSFYKRSLDNDIYIFTAPYLNKSRESSYES
GILVSKAVELDFRGVKLKPAVVGVKLNVSAWMNSFMNATMKINCKDEICGCLRNDKHVDC
VILDDGGFLLMSNQEEYITQIGQFFGEVDPVLMISLVNTSLYSFNKTYDYQSVCDPERET
KAASGPRSVYVPTIADMLSVGWWASTAAWSMLQHLLLTLTYPSFLEAAYSEEDTSDAYSK
ESCITEQTQYFFENDNRSFQGVLDCGNCSRMYRAEKLPSTNLVFLITDAKSTCLSCDPKP
LKQAEQPSIGPDPCMLAQNPRYRKGPDVCFDNNDDEDASDCGGGCSLTPSLLHVLALQLL
LLWLLSGPRGCSS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgaactcccacacctccaccctgctgctgctcaccctgctgcacgcgctgcacactgtc
caaccgtcccagttcccatcctctctcatgataaaggagtgggtggatcagatgcagcag
gaactggtcaatctggcagatatggccagcgcagggaagagcctagcacagatttatatg
gataatcagaatctcttcaccctggaacccaacaatgcaggaaagctggtggaagatgca
gcacggaatatagaaaacttcttaaagaagcgtgcgaaagctctggaggctctggcagct
gctgccgaaacctcccagatggagcatcaatggaaggatgagtttgcagacgaggagata
gtctatttcaatgccaaggacaatcttgacgctaatgagacacaagaagggaggatacac
cggatcagaccggattttaaggaggatccctcatttaaaaatcgccttatatcctacaac
cattcggctgtgcacatcccaacggacatatatgacggctctaccatcgttcttaatgag
ttgaactggactgaagcattggaggatgtgtttaagaagaaccgggaagaggacccaact
ttactctggcaagtgttcggcagtgctactggacttgcccgctattaccctgcttctcct
tggaaggatgccaggaagacaccaagtaaaatcgacctgtacgatgtccgtcgccgaccc
tggtatgtacagggcgctgcctctcctaaggacatgctgattctggtggatgcgagcggc
agtgtgtctggattaactctcaaactcatccgaacatccgtcagcgagatgctggagacg
ctctctgatgatgactatgtaaatgtggtgaatttcaacaccagagtgaacaacactgcg
tgcttcgaccatctggtccaggccaacgtacgcaacaagaagattctgaaagacggcgtg
cagaacatcacagcgaagggcatcacaaactacacaaagggcttcgaatttgccttcaaa
cagctctcagatccaaatgtgaccagagcaaactgcaacaaaatcatcatgctgtttaca
gatggaggagaggagcgagctcaggagatcttctccagatacaaccctaaaaaaaaggtt
cgcatattcacattctctgttggccagcataactatgacacagggcccatacagtggatg
gcctgcgccaataaaggttacttctatgaaatcccttctattggagccatccgcattaac
acgcaggagtatctggatgtcctgggcagacccatggtcctggctgatgctaaacaagtg
cagtggaccaatgtctacctggatgctttggagctgggtctggtcatcacaggcaccctg
cctgtcttcaacaagaccagttccgaggacggttcccgcaaacagcaccagaaccagctg
attctgggagtgatgggtgtggatgtgtctctggacgacattaaaagactaactccacgc
tttactatcggccctaatggttattattttgcgattgaccccaatggctatgtgctgctc
cacccaaacctccagccaaagaagaggatgcgtaatcgacacatcaggttaaaaaacaaa
tacgcaataacgtatcatgaggaacctgtgactctggacttcctggatgctgagcttgag
aatgatattaaagtccagatcagaacaatgatgattgacagggttcctggcaataagacg
attgacacactggtgaagactcaggatgagagatacatagatcgaggagtgaggacttat
acgtgggcgccggttaatggcacagactacagcttggccttggttttgcccgagtacaac
atgcactacatcgaggcaagcctgggggacctaaatcaagccaagttctttgagactatg
caagtggagaaatttgaggagaacggctacacctttattgcgcccagggaatattgccag
gacctgaaaatcacctctaacaacactcagttcctgatggacttcaaccagtacattgac
aagagaacacctagtgaccccatgtgtaatttgactctagtcaacaggcttttgctggac
gctggactcacggctgagctggtcacactctggaagaaacagcctatagaaggagtgtta
gccagatttgtggctactgatggtggcatcacccgggtttaccctaaaagtggtggagag
gagtggacggaaaatgcagaaaccttcgactccagcttttacaagaggagtttagacaat
gacatctacatcttcactgccccctatctcaacaagagccgggagtccagctacgagtct
ggtattctggtcagtaaagctgtggaactggacttcagaggggttaaactcaaaccagct
gtggtgggagtcaaactcaatgtgtccgcctggatgaacagcttcatgaacgctaccatg
aagataaactgcaaagatgagatctgcggctgcctcaggaatgataagcacgtggactgt
gtgattctggacgacgggggcttcctgctcatgtccaatcaggaagagtacatcacacag
ataggtcagtttttcggtgaggtggatcctgtgctgatgatcagtctggtgaacacttca
ctttactcgttcaataaaacctacgactatcagtctgtgtgtgatcctgagagggaaacc
aaagctgcttctggacccagatctgtatatgtgcctactatcgcagacatgctaagcgtg
ggctggtgggcctccactgcggcctggtcgatgctgcagcacctcctactcaccctcact
taccccagcttccttgaggcagcttattcggaggaggacacctctgatgcgtattccaaa
gaaagctgtataacagagcagactcagtacttctttgagaatgataacaggtcattccaa
ggtgtgctggactgtggaaactgctccagaatgtaccgtgcggagaagcttcccagcaca
aacctggtgtttctgatcactgatgctaagagcacctgcctttcctgcgaccccaaacca
ctgaaacaagcggagcagccctccattggaccagatccatgtatgctggcccagaatcca
cgctacaggaaaggtcctgatgtctgctttgacaacaatgatgatgaggatgcatctgac
tgcggtggcggctgcagcttgaccccctctctcttacacgtgctggcccttcagctcctg
ctgctctggctgcttagtggacccagaggctgctcatcctga
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