Astyanax mexicanus (Mexican tetra): 103045023
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Entry
103045023 CDS
T05042
Symbol
fyco1b
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103045023 (fyco1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103045023 (fyco1b)
Membrane trafficking [BR:
amex04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103045023 (fyco1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
NPV_P10
OxRdtase_C
EMP24_GP25L
Motif
Other DBs
NCBI-GeneID:
103045023
NCBI-ProteinID:
XP_022534442
Ensembl:
ENSAMXG00000002969
LinkDB
All DBs
Position
4:complement(51014614..51057687)
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AA seq
1401 aa
AA seq
DB search
MASVTVGENQLQRIIRDLHDAVAELSKEHAESGEPITDDCSSLHKFSSKLEYLLQFDQKE
KTTFLGSRKDYWDYFCDCLAKIKGANDGIRFVKSIPELKTSLGKGRAFVRYCLVHQRLAD
TLQQCLMNQKVTCDWYYARSPFLKSHLNADIINHLYELNEIQFDVASRGYDLDSEWPTFA
RRTLGSAVSVHGWRPPSRCSSVNSLVSSYSQQAQDFLPGQDFGTSLLGDLGELGELSCSA
TEDLRIELDQSELRQQQLLEQVRLLTDQSAELRQEVSDLQQKLFAAESANQEPLKKSDQA
EKANGQWPEDLDPKPQGTSRHLEERLSIAENKNMELLAKLDGALSEKGQQVANYCDSAWK
IQELLSKLKEVEVERLEAKRESEDRGRKAERLVQELKAREEKLKESEEKLGKLRASTEDD
KIAAVQQADELRTVVNRLQGALSVKEREAGNLNTQLQDLQSLLETREQQVEEMKKEHEDL
QQKNTGLKESLDVQIVSLQEQIKAKKTELSASTQKVQQLENQSRKLSGLSQKLECQSKKL
DEYKTQCTNLMEINAKLLQTVKRTEESSRELAQSRAAMENELAALKASEKQLKSKLDLSG
LEVEEREKSLLEENQRLEESIQQARIESSAKDLEMQKLEKELKELHAAVKEKSEGFDTRP
EEAIVKKEEQNQDLYLSKTFETGQAASRIALVEAQLDLNMKEVSRLQEEVVELRAQVQVT
ADEKMKLQALQEVTESSREDLRAQAEQLKAQVEELNRQHVEELLRCREREEALAKERDNE
AKARGELQAQVASMREDLRILKRQNSTLALENGDAREALHRANTETAELGVHVCMLTGQN
EEAHLRWEELSTRLQELEEEAQEEAQTLSLSVDALSKDNAQLLEDLKGKEELTKAMQELQ
ARLEEVQEEARSLQEGGQKEMDALRLQLSEETIQHQNQIKVLNEELEAARAQIEAEQEKV
CTLGTKLAELEVINCSYSQLIEEKTTYISNYDSLLLQKEEQINHIKADLSKAQQEFILAQ
KACQDLSENLRRIMTEKQTCDLKTSAEIDDLYRTKRNLEERLIELIRDKDALWQKSDALE
FEQKLRAEEQTDRELPYCLSCHTQFSWWLRRHSCKLCGRPFCYYCCSNTVSTQQGGSRER
CCKDCYMQHSAVVERHPQEELGSPGHPPYSPLASTPTRTSMPSVTVALQSPRPDDAVFDI
ITDEEVNCIYDGDSLPYTTALTPGRAQQAQDELSSGSASGGDLAAEESPEELLTSVQDAE
ICLLKSGEITLSETFSVKDIAEFGEDFRELFIKSSCYSLIPVTVDRAGPTISWVFSSSPK
SISFSVVYRESTDAPLEQAKVLIPLTRCNSHKESMQGQVKARKPGEYSLIFDNSFSRFIS
KKVLYRLSVDQPVVYDGSDCP
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgttacagttggagaaaatcagctccagaggataatcagagacctgcatgat
gcagttgctgagttgagtaaagagcatgcagagagtggggaaccaatcacagacgactgc
tccagtctccacaagttctcctctaaactggagtacttactgcaatttgaccagaaagag
aagaccaccttcctgggcagcagaaaagactactgggactatttctgcgactgtctggcc
aagataaagggggctaatgacgggatccgctttgttaagtctatccctgagctgaagacg
tcactggggaaaggtcgggccttcgtccgctactgcctggtgcaccagagactggccgac
actcttcagcaatgccttatgaaccagaaagtcacctgtgactggtactacgcccggagc
cccttcctgaagtcccacctcaacgctgacatcatcaatcacctgtatgagctgaatgag
atccagtttgacgtggcgtccagaggatatgatctagactcggagtggcccacattcgcc
aggagaactctcgggtcagcagtatctgtccatgggtggagaccgcctagccgttgctcc
agtgtgaacagcctggtcagcagctactcgcagcaagcccaagatttcctcccaggccaa
gactttggcaccagtttgcttggcgatctaggagaacttggagaactctcatgtagtgcc
acagaggacctacgtattgaacttgaccaatcagagctacggcagcagcagcttctggaa
caggtgcgcctgctcactgaccaatctgcggagttaaggcaggaggtcagtgatctccag
cagaagctatttgctgctgagagtgccaatcaggagcctttaaagaagagtgaccaggca
gagaaggctaacgggcagtggcctgaagatcttgaccccaaaccacagggaacttctaga
caccttgaggaacgactgagcatcgcagagaacaagaacatggagctgcttgccaagcta
gatggtgctctgagcgaaaaaggccagcaggttgccaactactgtgattcggcctggaag
atccaggagctgctgagcaagctgaaagaggtggaagtggagaggctggaagccaagcgt
gagagcgaggatcggggaagaaaggcagagagattggtccaagagctcaaggctcgggaa
gagaagcttaaggagagtgaggagaaacttggcaagcttagagcatccacggaagatgac
aaaatcgcggcggttcaacaagctgatgagctccgtacggttgtcaatcgcctccagggg
gcgctgtctgtgaaagaacgggaagcagggaacttgaacacccagttgcaggacttgcag
agcttgctagagacaagggagcaacaggtagaggagatgaagaaggaacatgaggatctg
caacagaagaacactggtctgaaggagtccctagatgttcagattgtgtcactgcaagag
cagattaaagcaaaaaagaccgaactctctgccagcactcagaaggtccagcaacttgaa
aaccaaagccgcaaactgtccggactctctcaaaagctggaatgccagagcaaaaagctg
gacgagtacaagacccagtgcacgaatctcatggaaatcaatgccaagttgcttcaaacg
gtcaagaggactgaggagagcagccgggaacttgcccagagcagagcagccatggagaac
gaattggccgctctaaaagcctctgagaagcagctcaaatccaagctggatttgtctgga
cttgaagtggaggaacgggagaaaagcctcctggaagaaaaccagcgactcgaggaaagc
atccagcaagccagaatcgagagtagtgccaaggacctagagatgcagaagttggaaaag
gaacttaaggagcttcatgctgctgtgaaagagaaatctgaaggatttgatacaagacct
gaggaggctatcgttaaaaaggaagaacagaatcaagacctctacctaagcaagaccttc
gagactgggcaagcagcttctaggattgctctagtcgaagcccagctggacctgaacatg
aaggaggtctccagactccaagaggaggtggtggaactccgtgcccaggttcaagtgacc
gccgatgagaagatgaagcttcaggcactgcaggaagttaccgaatcctctagggaagat
ctccgtgcccaggctgagcaactcaaggctcaagtggaggagctgaaccgccagcacgtc
gaggagctcctccgctgccgggaaagagaggaggcactggcgaaggaacgagacaacgag
gccaaggccagaggcgaactccaggcacaagtggcgtcaatgagggaggaccttcgcatc
ctgaagcggcaaaacagcacccttgctctggagaacggagacgccagggaggccttgcac
agggccaatactgaaacggcagagcttggcgtgcatgtctgcatgctgaccggtcaaaac
gaggaggctcatctgcggtgggaggagctatctacaagacttcaggaactggaagaggag
gcgcaggaggaggcgcaaactcttagcctctcggtggacgcactgagcaaggataacgcc
cagctcctggaggatttgaaaggaaaggaggagctgacgaaagcgatgcaggagcttcag
gcgaggctggaggaggtgcaggaggaggccaggagcctgcaggagggcggccagaaggag
atggacgctctgaggcttcagctgagtgaggagaccatacagcaccagaaccagataaag
gttttgaatgaggagctggaggcagcgagagctcagatagaagccgagcaggagaaggtg
tgcaccctggggaccaaactggcagagcttgaggttattaactgcagctacagtcagctg
attgaggagaaaaccacctacatctcaaactacgattctctgctccttcagaaagaagaa
cagatcaaccatatcaaagccgatttgtccaaagctcagcaagaattcatcctggctcag
aaagcctgtcaggacctcagtgagaacctgcgcaggatcatgacggagaagcagacgtgt
gatctgaagacgtctgcggagatagatgatctttaccgcaccaagaggaacctggaagag
aggcttattgagctcattagggataaggatgctctgtggcagaagtctgacgctctggag
tttgagcagaagctgagagccgaggagcagacggaccgagaattaccctactgcctgagc
tgccacacgcagttcagctggtggctgcgcagacacagctgcaagctctgtggtcgtccc
ttctgctactactgctgcagtaatacagtcagcacccagcagggcggcagcagagagcgt
tgctgcaaggactgctacatgcagcacagcgcagtggttgagcgccaccctcaggaggag
ctaggcagtcccggccacccaccctacagccccctggcctccactcctacgagaaccagc
atgcccagcgttacagtggcgctgcagtccccccggccagacgacgcagtgttcgatatc
atcacagacgaggaagtgaactgcatctacgacggagactcgctgccctacaccacggct
ctgacccctgggagagcacagcaagcccaggatgagctgagcagtggcagtgccagtggt
ggtgatctggcagcagaagagtcaccggaggagctgctgacctcagtgcaggacgccgag
atctgcctgctcaaatctggagagattacgctgtctgagacgttctctgtgaaggacatt
gctgagtttggagaggacttcagagagctcttcatcaagtccagctgttacagtctgatc
cccgtcactgtggaccgagccggacccaccatcagctgggtcttctcttcctcacctaag
agcatctccttcagcgtggtgtatcgagagagcacggatgcaccgctagagcaggccaag
gttttgatcccattaaccagatgcaactctcataaagagagtatgcagggtcaggtgaag
gcgcgcaaacctggggaatactcgctcatcttcgacaactccttctccaggttcatctcg
aagaaagtgctctacagactgagcgtggatcagccggtggtctacgacggcagcgactgt
ccttaa
DBGET
integrated database retrieval system
