Astyanax mexicanus (Mexican tetra): 103045336
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Entry
103045336 CDS
T05042
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
103045336 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
amex04054
]
103045336 (nod2)
Pattern recognition receptors [BR:
amex04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103045336 (nod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
LRR_6
NLRC4_HD2
WHD_NOD2
LRR_4
AAA_16
nSTAND_NTPase5
AAA_22
AAA_30
AAA_29
Sigma54_activat
AAA_25
DUF815
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-GeneID:
103045336
NCBI-ProteinID:
XP_049326962
Ensembl:
ENSAMXG00000018642
LinkDB
All DBs
Position
23:complement(11838879..11851244)
Genome browser
AA seq
983 aa
AA seq
DB search
MSGQQLVLRQRTELLGALCCGGTAEPLDCVLDLLLSWGVIVWEDYLSVREPAKPLCSSAR
ELLDLVYNKGEESCLLLLSAFKQVLPDAQKAGLCFGKSFAAGKDAKRTSTNASQTLMTDR
PALVRKIRDHIDGVLEALVNAGCFTSKDCDEVMLPVYTPSQKVRRLLDQVRFRGEEAASI
LLQYLRLAEVVSQPVKEEKQLTAECLLYQKKLRSSVSAQSHFLSTYGGTGRFSLDDIYTE
GLLELAQGNREITSLGLEDVVGVTGTLNEDADTVLLSGEAGTGKSTLLQRLHLLWARGAL
LTDILLLFPFSCRKLNAEQRMLSLKELLFLHCCWPDRGQDELFQFILDHPHLVLFTFDGL
DEFKQTFTDEERHCCPTQQASIPVLLFNLLQGTLMKGVKKVVTSRPQAVGPVMKRYLRKE
VLVKGFCPVGIDAFVRKHHNDSTVASRVIESLQTNTALLGLCHIPVFCWIVSKCYKELLG
CGEGSPQTMTDVYLMVLQHFFQRKVPQEQGALGKGWLQKHLETVMRFGQLAMEGLETSCY
VFPEAELRKYGITEQEICLGFLIHCKDLSDSSDCKHYEFLHMTLQCFFAALHIVLDGNSN
RSVIPKLFQSQYRQLSGITRVCLGHCIDRPLEDDVNTAETPNLQMAAKFVSGLLSQRHRI
LLSQSCPAATLEWKSKQAVKCLSKGMQRHFRSISRPVEGEKKSMHAMPSFVWLITCIYEM
QESGVAKDAVAKIEVEHLKLTYCNIGPVECTALAYVLKHLPNPVGLQLDYNTVGDVGVEQ
LLPCLHVCHALYLRNNNISDEGIRKLVEKGVHCECFQKLALFNNKLTDDCTRHLVTLLQA
KTNFISLRLGNNNITSQGAEQLAEGLRYSKSLQFLGLWGNKIGDKGAEALADALKNSTAL
TWFSLVDNGVGNSGACALAELIKRCTTLTELWLNQNCIGREGVECLIQALKANTSIKEVW
LRGNNLSPEEVEELSQRESRLTF
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtctggacagcagctggtcctgaggcagagaacggagcttctgggagctctatgctgt
gggggcacggctgaacccctggactgtgtgctggatcttctgctgtcttggggtgtaatt
gtgtgggaagactacctaagtgtgcgggaaccagccaaacccctctgctccagtgccaga
gaactgctggacttggtgtacaacaaaggcgaggagtcctgtctccttctactgtcagcg
tttaagcaagttttacccgacgctcagaaagccggactctgctttggtaaaagttttgct
gcaggaaaggatgctaagaggacctccactaatgccagtcagactttgatgactgataga
ccagcactggtgaggaaaatacgggatcatattgatggagtgctggaagcgctggtaaac
gctggctgctttacttcaaaagactgtgatgaggtgatgttacctgtttacacaccttca
caaaaggttaggaggctactggatcaagtgagatttagaggggaggaagcagccagcatc
ttattgcagtatctgcggctggcagaagttgtgtcacagcctgtaaaagaggaaaagcaa
ctcactgctgaatgcctactttaccagaagaagcttcgcagctctgtctctgcccagtcg
cacttcctcagcacttatggaggaacgggaagattctccttggacgatatctataccgag
ggcctccttgaactggctcagggcaacagagagatcacaagtctagggttggaggacgtg
gtaggtgtgaccggaactcttaatgaggacgctgatacggtacttctatctggagaggcg
ggtaccggcaagagtaccttgctgcagaggctccacttgctgtgggctcgaggggctttg
ctgacggacattctcctgctgttccccttcagttgtcgcaaactgaacgcagagcagagg
atgttgtctttgaaagagcttttgttcttgcactgctgttggccggacaggggtcaagat
gagctgttccagtttattctggatcaccctcacttggtgctgtttacgtttgatggcctt
gacgagtttaaacagactttcacagatgaagaacggcattgctgccccacccagcaagca
tctatacccgtgctgctatttaacctactccagggtaccttgatgaagggcgtgaagaaa
gtggtgaccagcaggccgcaagcagtgggtccggtaatgaaacggtaccttcggaaggaa
gtccttgttaagggtttctgtcctgtcggaattgacgcctttgttagaaaacaccacaat
gactctactgtggctagcagggtgatagagtccttgcagaccaacacagctttacttgga
ctttgccatatcccagtcttctgctggattgtgtccaaatgttacaaggagcttctcgga
tgtggggaaggcagccctcaaaccatgacagatgtgtacctcatggttctgcagcacttc
ttccagaggaaggtgccccaggaacaaggtgccctgggaaagggatggctgcagaaacat
ctagaaacagtgatgagatttggacagctggccatggaaggtcttgagacgtcctgttat
gtattcccagaggcagaactgcggaaatatggcatcactgagcaggaaatctgcctgggc
ttcctcatacattgtaaggacctctcagactccagcgactgcaaacactacgagttccta
cacatgaccttacagtgtttctttgccgctctgcatatcgttctcgatggcaacagcaac
cgttctgtcatcccaaagctcttccaatcacagtacaggcagctttcaggcataactcgc
gtgtgcctcggacactgcatagatcgccccctagaggatgacgttaatacagcagagacc
ccaaacctgcagatggccgctaagtttgtgtcaggacttctttcccagcgccatcgaatc
ctactgtcacagtcctgtcctgctgccacacttgaatggaagtccaagcaggcagtcaaa
tgtttgtccaaaggcatgcagaggcacttccgctccatctctcggcccgtcgagggcgaa
aagaagagcatgcatgccatgcccagcttcgtttggctcatcacctgcatctatgagatg
caggagagcggggttgcaaaggacgccgtagccaagattgaggtggagcatctgaaatta
acttactgtaacatcggtccagtggagtgcaccgctctggcctatgtgctgaagcacctt
cccaatccagtcggcctccagctagactacaacacagtgggagatgtgggagtggagcag
ctcttgccatgtctgcacgtctgtcacgctctctacttgaggaacaacaacatatcagat
gaaggaatacgcaaacttgttgaaaaaggagtgcactgtgaatgcttccagaaactagcg
ttattcaacaacaaactaacagatgactgcacgaggcatttggtcacactgcttcaggcc
aagaccaatttcatttcactaagacttggaaataataacatcacatcacagggggcggag
cagctggcagagggtctgagatatagcaagtcattgcagtttcttgggctgtggggtaat
aagattggagacaagggtgccgaggctttggcagatgcactaaagaacagtactgcactg
acatggtttagcctggtggataatggtgtaggcaactcaggagcctgtgctttagcagag
ctcatcaagagatgcacaacacttacagagctctggctaaatcagaactgcattggcagg
gaaggtgtggagtgtctaatacaggctttgaaagcgaacaccagtattaaggaagtgtgg
ttgaggggaaacaatctgagcccagaggaggtggaagaacttagtcagcgtgaaagcaga
ctgaccttctga
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integrated database retrieval system
