Astyanax mexicanus (Mexican tetra): 103046528
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Entry
103046528 CDS
T05042
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00310
Lysine degradation
amex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103046528 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103046528 (prdm6)
03036 Chromosome and associated proteins [BR:
amex03036
]
103046528 (prdm6)
Enzymes [BR:
amex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
103046528 (prdm6)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
103046528 (prdm6)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103046528 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
zf-C2H2_15
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
103046528
NCBI-ProteinID:
XP_007260865
Ensembl:
ENSAMXG00000012588
UniProt:
A0A8T2LGL0
LinkDB
All DBs
Position
12:complement(36646805..36690297)
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AA seq
577 aa
AA seq
DB search
MLKHGEPSGSAFLKVDPAYIQHWQQLFPHSQLKHAALAQLPLPADSLRQRPGLVSSSSSS
SAAAALTPSSNSSSSSSASSSSASLTPSASSAAVSSLAGFTQLSVPQVALFGQTLCPSEA
LPGLEDGAAAAKELCAPASLKSDRGSRFRLTSEELDYYLYGQQRMEIIPLNNHAGDVNNR
CDMCADNRNGECPMHGPLHSLRRLVGTSSASATVPPPEVPEWLRDLPREVCLCTSTVPGL
GYGICAAQRIPQGTWIGPFQGVPLLLDKVQSGAVRNTRHLWEIYDQEGTLLHFIDGNEPS
KSSWMRYIRCARHCGEQNMTVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQC
IAQDENLNVPSTVIEAMSRQESLQPFSKTSKSSSSILQRSMVFPHSPCSRTFSLLDKTGS
TESGFNQLSAKNQRVLASPTSTSQLNTEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPD
RPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFK
CERCDRSFTQATQLSRHQRMPNECKPISESSESIEVD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcacggggagcccagcggttctgctttcctcaaagtggacccggcgtacatc
cagcactggcagcagctcttcccgcacagccagctcaaacatgcggccctggcgcagctg
cccttgccggccgacagcctccgacagcggccgggcctcgtctcctcgtcctcctcttcg
tcggcagctgctgctttgacaccatcctcgaactcgtcctcctcatcctctgcctcctcc
tcatccgcctcactgactccctccgcttcctccgcggcggtatcgtctctggcgggcttt
acgcagctctccgtgccgcaggtcgcgctcttcggacagactctctgcccctccgaggcg
ctgccggggctggaggacggcgcggccgcggccaaagagctgtgcgctccggccagcctg
aagagcgaccggggctcccggttcagactcacctccgaggagctggactattacctgtac
ggacagcagaggatggagattatacctctcaacaaccacgccggggacgtcaacaaccgt
tgtgacatgtgtgcggacaaccggaacggggagtgccccatgcatgggcccctgcactcc
ctgcggcggctggttgggaccagcagcgcatcagccaccgtgcctcctccagaggttcct
gagtggctgcgggacctgccccgagaggtctgcctctgcaccagcactgtccccggcttg
ggctatgggatctgtgctgcccagcgcatccctcagggcacctggatcggcccgtttcag
ggtgtccctttactgctggacaaggtgcagtccggagcggtgaggaacacaagacaccta
tgggagatctacgaccaggagggcacgttactgcactttatcgatggcaatgaaccaagc
aagtcgagctggatgaggtatatccgctgtgccagacactgtggggaacagaacatgaca
gttgttcagtacagatcgtgtattttctaccgggcctgcatggacattccacgaggaacc
gagctccttgtctggtacaatgacagttacacatccttctttggcatccccctgcagtgc
atcgcacaagatgaaaacttgaatgtgccatctactgtaatcgaggccatgtcccgacag
gagagcctgcagcccttcagcaagacgtccaaatcctcctccagcattctgcagcgctcc
atggtcttccctcactcgccctgctctcggaccttctctctcctagacaagacaggcagc
acagagtccggcttcaaccagctgagcgccaagaaccagcgagtgctggccagccccacc
tccaccagccagcttaacacagagttcagcgactggcacctgtggaagtgtggccagtgt
tttaagaccttcactcagcgtattcttctacaaatgcacgtgtgcacacagaaccctgac
agaccgtatcagtgtggacactgctcccagtccttttcccagccctctgagctccgcaac
cacgtggtcacacactccagtgacaggcccttcaagtgtggctactgtggacgagctttc
gccggggccaccaccctcaacaaccacatccgcacacacaccggggagaagccattcaag
tgtgagcggtgcgataggagcttcacgcaggccacgcagctcagcagacaccagcggatg
cccaacgagtgcaagcccatcagcgagagcagcgaatcaattgaggtggattag
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