Astyanax mexicanus (Mexican tetra): 103046610
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Entry
103046610 CDS
T05042
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
103046610 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103046610 (phc1)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
103046610 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
PHC2_SAM_assoc
SAM_PNT
DUF5543
Motif
Other DBs
NCBI-GeneID:
103046610
NCBI-ProteinID:
XP_007256935
Ensembl:
ENSAMXG00000010182
UniProt:
A0A8B9K866
LinkDB
All DBs
Position
6:26577600..26587779
Genome browser
AA seq
905 aa
AA seq
DB search
MEQAEEQGNSGSTNGSTPSGGNSRSPQIAQMSLYERQAVQALQALQRQPNAAQYFQQLML
QQQISSAQLHNLAAVQQATLAASRQSSSPSNSVSAASSTAQCTVNLSTTAGGGTMTNPRP
MGPATSAASTALSQSVLLGGNSTGQGQMYLRMNRSLRAPLTPQLIFMPGGTATAAVATVT
QQQPQQQQPQQQQQQQQQDVPPTSSSNQSDNDQVQNLAMRCVSTPRVAAVKTEFPDRKDA
GSFSLGQNQTQQFGQSTQQITAQTQQLANTKLATYSTTNNATLASIGVKAQNQATLPTQQ
PGTASSATPSSSSSASSPLLPLSQLLLSPSGLCQARGVTAPAATVTHILVPTSNVPTSSQ
GYPVGSVAPKSNMAAQTLVVQPLQQSSGNLGTEKVTHGTGPVPIQPKTAQSHRLPTQIPP
RHPPPILPAPPSGGQTPHHPPHVPVQLVGGRQGTLGNSQPLTVAQARNCCPHQDGTATAG
VPINSSNGNVVTVVAAMETNGAGVCLKSAQSALPVCAVQTNQNAALNQSHSADGQNNPGV
MSTAEESVFEQSVSAQTKPVIGSLKRKSESDVTNEMSTEASAHCCPSITDSAPPLSPAPC
LDTAPEVAFSTPPTLSLSLPLPRGGVQGERAPLPQAVVKPQVLTHLIEGFVIQEGAEPFP
VTGPVKDRAEGIPVNMPIAMQSKNNAPSVLKCEFCGSFAPASQFRGSKRFCSNTCAKRYN
VSCSTHFRTRRVRSVGEQPPMPAVVQDGIARRRGPRRSSSEIACAKIASRHLSVKCRSES
SRSEDISSCEGEEEEEDSLSLSPSSSFSCPRPAHCGPQLDDTTQGDLPLDGEHFLSASPA
HWSVEEVCRFISSLQGCEDLAGQFLSQEIDGQALLLLKEEHLMTTMNIKLGPALKICASI
NNLRD
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagcagaggaacagggcaactccggctccaccaatggcagcactccatctggg
ggcaactcccgctccccacagattgctcaaatgtctctgtatgaaagacaagctgtccag
gcgcttcaggctctgcagaggcagcccaatgcggcccaatattttcagcagctgatgctg
cagcagcagatcagcagtgcccagctccacaacctcgccgctgtgcaacaggccacactt
gccgccagtcgccagtccagttcccctagcaacagtgtctctgcagccagcagtacggct
caatgcacggtcaatttaagcaccaccgctgggggagggaccatgacaaatccccgccca
atgggcccggcaacctctgcagcatcaaccgctcttagccagtctgtattgctgggtggg
aactcgactggacagggccagatgtatttaagaatgaatcggtctcttagggctcccctc
acccctcagctaatcttcatgccgggtggcacagcaacagccgctgtggcaacggtaacc
cagcaacaaccccagcaacagcaaccccaacaacagcagcagcagcagcaacaggatgtc
cctcccacatcttccagtaaccagtcagacaatgatcaggtgcagaacctggcaatgcgc
tgtgtgtccacaccccgggtggctgcagttaaaactgagtttccggacaggaaggatgct
ggatccttttctcttggtcagaatcagacacagcagtttggtcagtcgacacagcagatc
acagcccaaacgcagcagctagctaacactaagcttgccacctacagtaccaccaacaat
gccacactggccagcatcggtgttaaggctcagaaccaagccaccttgcccacccaacag
ccaggcaccgctagttccgctactccctcatcctcatcctctgcctcctctcctttgctc
cctctctctcagctcctgctgtctccgtccggactctgccaggcgcgaggcgtgactgca
cccgctgcaacagttactcacatcctggtgcccacctctaatgtgcctacttcctcgcag
ggataccctgtgggttctgtggcacccaaatccaacatggcagctcagacattggtggtt
cagccactgcaacagtccagcggaaaccttggcacggaaaaagtaacacacgggacgggc
ccagttcccatccagcccaaaacagcccagagtcatcgactgcccacacagattccccca
cgccaccctccccccatcttaccagcaccacccagcggcgggcaaacgccacaccaccca
ccccacgttcctgtccagctggtgggaggcagacagggcacgctgggaaactcacagccc
ttaaccgtggcccaggcccgcaactgctgcccccaccaggacggcacagcgacggccgga
gtccccatcaacagctctaatggaaatgttgttactgttgtggcggccatggaaacaaac
ggagcaggggtgtgccttaaatcagcccaaagtgccctacctgtttgtgcagtgcaaacc
aatcaaaatgcagcattaaatcagagccactctgctgatgggcaaaacaaccctggtgtc
atgagcacagcagaagaatctgtttttgagcaatccgtttcagcccagacaaaacctgtg
attggttccttgaaaaggaaatcagaatcagatgtaaccaatgagatgtcaacagaggct
tctgcccattgctgtccttcgataacagactctgccccgcccctttctccggctccttgt
ttggacactgctccagaggtagctttctccactccgccaaccctgtctctgtctctgcct
ctgcctcgaggcggggttcagggagagcgagcccctcttccacaagccgttgtaaaaccg
caggtgcttactcacctaatcgaaggcttcgtcatccaggagggagcagaaccattccct
gtgaccggtccagtaaaggatcgagcagagggcattcctgttaatatgcctattgccatg
cagtccaaaaacaatgccccctctgtgctgaaatgtgagttctgtgggagctttgcacct
gccagccagttccgagggtccaaacgcttttgctccaatacctgtgctaagaggtacaat
gtgagctgcagtacccactttcgcacccgccgggtccgcagtgtcggagagcagccacca
atgcctgctgtggtgcaggatgggattgccaggcgcaggggtcctcgcaggagtagctct
gagattgcctgcgctaaaatagcgagcagacacctttcagtgaagtgccgttcagaatcc
agtcgttctgaggacatctccagctgtgagggagaggaagaagaggaagactcactctca
ctctctcccagctcttccttttcatgccctcgccctgcccactgcggccctcagttggac
gacactactcaaggcgacctcccattggatggggagcactttctgtctgctagccctgcc
cactggagcgtggaggaagtgtgtcgattcatttcctctctacaaggctgtgaggacctt
gcgggtcagttcctgtctcaagagattgatggacaggcattgcttttactcaaagaggag
catcttatgaccaccatgaacatcaaactgggtcctgccctgaagatctgcgcttccatt
aacaacctgagagactga
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