Astyanax mexicanus (Mexican tetra): 103047569
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Entry
103047569 CDS
T05042
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X4
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103047569 (ttc3)
Enzymes [BR:
amex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103047569 (ttc3)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103047569 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
TPR_1
zf-RING_UBOX
TPR_11
TPR_2
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
Prok-RING_1
TPR_8
zf_RING_Vps8_fungal
zf-RING_Vps41
TPR_17
Motif
Other DBs
NCBI-GeneID:
103047569
NCBI-ProteinID:
XP_007247347
LinkDB
All DBs
Position
20:35152016..35197866
Genome browser
AA seq
1885 aa
AA seq
DB search
MDRHSHLDCCSCGLLPTMLESDDSDIEDGPDVVRHKTKIIYQNTFPYIHMEPPDVLYERW
ARIKLEVREAVGHMMHISVFWWHILFRQQDNHDTTAWAVDMGFLDSNVSNDLNLKRLHRI
ELLELILNTVERCLADTDPERKARELVLLSTSFKLQEECLVKAVSWLEEFGPTGLSRRLL
DLGSKHIRYQILQFIFIEYARYIQVMSCSKKKMIRELSVDPDQWNLQKSEEMKNKGNEQF
QKKKYDMAVKWYTKAIKYHTNNHLLYGNRALCFIRCEKYLKAMGDGKRAIILQKNWAKGH
YRFCDALFFLGAKDKAVEANVLAQQLCGADPEGMRDLQQQYFRFLNEPYEEKDEVKPRKP
ESKKAPGKRFEAACGMEPSTEHLNSHREPELVSCTKENEQKAEDRREEEDPPGKSRSGPH
AEESSRASRDAKSEMPDRKTKKVPPGTPEKTTLRSKHSSAPEKPQPSNSGAGSKEQFCAA
VQDAHTALTDQRCRNAEQAFSLALNILESSGIEALGITTLDRSLLIYGCATALVEIGQPE
DLAKARRQFKELSSLEDRKFQSLVHYGNGNLYLKENRFSEALEEFCDALLMVQRKITPGK
LTWPTTKVTIEETRPEYLEEQLQTSIELCKFPPKPDAMCRYDNCRSKKVYFTDPDFKGFI
RITCCQSCNVEYHINCWKKLKSASFADKNDKDFLQDFCFTPDCTGRICHFVIFGSTGLIK
CKFESSVPKSKAPGRLRVKQKCTSLKKLKSKEDRKLKRKQQRAAAAVANSEANILTREEG
RDHQREEQTASTKEDYTKYGDRVLQQIYERREHFNDEIHNISTMLTCLRSWMELDEANGH
VSMLKDCAEPHVLSDLVDLLLKRSNRVWARLFVHKLSGCSNLKPKLHDWALQLDRAGFVA
AQNFIDRYGNRLEDLDLSPLLEFHPLKEVLIEKFGTMPDLFDISGVTVMDYLRQAPPQEM
RLFIWALEEHRERYPTCCTILDEYFETDGICLVIRKTENDEHLSSGCKGKSKNRKKKQKE
PKPVLVLSGMRSGALRDEDDEDIFSEEDSLFLLDATDPFSVPDRLRERVAEFEGHYTGRL
NQNKRVLDNNPDPTKESLYDYFAQILEQYGPLEVSNPLLVGELENFPLEAQQKIEGAGGL
EAFLLESLRFVMNENRIGLTRHAVTLQNSMADDASAFPDCVPHTFGTETLEFRGSYYLDP
TAREFLPQYEHFSDRNASCDIPGILSDEDSSASGLCEPTLPDPYVLESQQARNGDCMFVP
EDTSMFAAFSSGLTVPECSGYVHGSELNFYNSAYPPEMNSINACSEKGGGQPCSEIIRNE
AKKSENKTISVQTFGYNKDTKDDVAVNTEPCALLERNKGDMILKEKNNIKLEKCIQNAKD
TRSSRQITRKEELSVLEAQVKEAQQKIEITNKELSLFQQKLEEEIRKDQQEKKHNQETLK
TLKGEIKELLDLQESYTKQIQDKNEEYQTALNQFCAISNQSAAEKMSLEEEIKRRRDVCA
KASNRSVAAQLSVLQNKRENGLRKLKKCVGDGKAILQNMTELSSRYPSGSLFSTIEAWKS
CVLEAEEKIRRTRAQYEEQIELLKKGTKLCSLPPVSVPNAPAPPPLPAFLNTPSNQQQVP
QQFPVGHRQPHAPYSVNQHPVRPQMHSAVYVPLAPPAERIVRTQPAPSVPATRVEAPQKP
AAPAPAPAQASAPAPVQQHLSVFEKIIDHLSLMFPHYSRAVLSKFIQEVRNASGSLNQLT
YEEVINRVTQLILDHQDESREQISLVRRAGVRENVVPSPTPSGDSSRATPTPPPAHVWKS
VSSHQRGTSKALNMEDPCIICHEDMATEDLCVLECRHSFHRECIKSWLREQSTCPTCREH
ALLPEDFPMLPGRHHRGHTSAASSS
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggacagacattcacatctggactgctgtagttgtgggcttctgcccacaatgttggag
tctgacgattcagatattgaggacggtcctgatgtggtccgacacaagaccaaaattatt
taccagaacacctttccatacattcacatggaaccacctgacgtcctgtatgagcgttgg
gctagaataaagctggaggtgagggaggctgttggacacatgatgcacatctctgtgttc
tggtggcacattctgttccggcagcaagacaatcacgacaccactgcctgggcggtggac
atgggcttcctggactccaatgtttcaaacgatttgaatttgaaaaggctacacagaatt
gaactcctggagctcatcctgaatacagtagagagatgtctggcagacacagatcctgaa
agaaaagcacgggagttggtactattaagcacatcttttaaactgcaagaagagtgtctt
gtaaaggcagtgagctggcttgaggagtttggaccaacaggcctaagcaggaggctgctg
gaccttggctcaaagcacattcgctaccaaatacttcagtttattttcattgagtatgct
cgttacattcaggtgatgtcatgcagcaaaaagaagatgatcagggaactgtcagtagat
cctgatcagtggaatttacagaaaagtgaagaaatgaagaacaaagggaatgaacagttc
cagaagaaaaagtatgatatggctgtgaagtggtacacaaaagccattaaataccatacc
aacaaccatctgctgtatggaaacagagcactttgctttatacgatgtgaaaaatacctg
aaagccatgggtgatggcaaacgagctattattctgcaaaaaaactgggcaaagggtcac
tatcgcttctgcgatgctttgttctttctgggagctaaagataaagcagtggaagccaat
gttttagctcagcagctgtgcggtgctgatccggaaggaatgagagatcttcaacagcag
tactttcgcttcttgaatgagccttatgaggaaaaagatgaagtaaaaccaaggaaaccg
gagtcaaagaaagcacctggtaaaaggtttgaagcagcatgtggcatggagccctcaact
gaacatctaaattctcacagagagcctgagcttgtctcctgtactaaagagaatgagcag
aaagcagaagacagaagggaggaggaagaccctccaggtaaatccagaagcggaccgcac
gcagaggagagctccagagcctcccgggacgctaaaagtgaaatgccagacagaaagacc
aagaaagtcccgccaggcactccggaaaaaacaactctaaggagtaaacactcatctgca
ccagaaaagcctcagcccagcaacagtggtgcaggcagcaaagagcagttttgcgctgca
gtgcaggatgctcatacggcgctcactgaccagcgctgtcgcaacgcggagcaagccttt
tccctggccctcaacattctggaatctagtgggattgaggctcttggcatcactacactg
gacagatccttgcttatctatggctgtgcaacagcattggttgaaatcggccaacctgag
gacctggcaaaagctcggaggcagtttaaggaattaagctcgctagaggaccggaaattt
caatcattggttcactatggaaatggaaatctttatctaaaagagaacaggttttctgaa
gctttagaagaattttgtgatgctcttttaatggtgcagaggaagatcacacctggaaaa
ctcacctggcccactactaaagtaacaattgaagagaccagacctgagtatttagaggag
cagcttcagacctctattgagctctgcaaatttccacccaagccagatgcaatgtgtcga
tatgataactgtcgatccaagaaggtgtacttcacagacccagactttaagggtttcatt
cgaattacatgctgtcagagctgcaacgtggagtatcatatcaactgctggaaaaaactc
aaatctgcatcatttgctgataaaaatgataaggactttcttcaggatttttgttttact
ccagactgtactggtagaatctgtcactttgtaatatttggctcaactggacttattaag
tgtaagtttgaatcatctgttcctaaaagcaaagcacctgggagattgagagttaagcag
aaatgtacaagtctaaagaagttgaaatctaaagaggatcgaaagctgaaaaggaaacag
cagagagcggctgcggctgtcgccaacagtgaggcaaacatcttaaccagagaagaggga
agagaccaccaaagagaagaacagacagcatcaaccaaggaggattacactaaatatgga
gaccgtgttttacaacaaatttatgaaaggagagaacattttaatgatgaaatacacaat
atttctaccatgttaacgtgtctgagatcatggatggagctggatgaagctaatggacat
gtaagcatgttaaaggattgtgcagagcctcacgttttgagtgaccttgtcgacctgcta
ctgaagaggagcaaccgcgtctgggctcgactttttgttcataaactcagtggctgcagt
aacctcaaaccaaaacttcacgactgggctctgcagcttgacagagctggttttgttgct
gctcagaactttattgatcggtacggtaatcgtctggaggacttggatctatcaccgctt
ttggaatttcacccactaaaagaggtcctgatcgaaaagtttgggactatgccggactta
tttgacatctcaggtgttactgtaatggattacctcagacaagctccaccacaagaaatg
cgtctgttcatctgggctctagaagagcacagagagcgataccccacttgctgtactatc
cttgatgaatattttgaaacagatggaatatgtttagtgattaggaaaactgagaatgac
gaacacttaagttcgggttgtaaaggtaaaagcaaaaatcgaaaaaagaagcagaaagaa
ccaaagcctgttcttgttctgtcggggatgagaagtggagccctgagagatgaagacgat
gaggatattttctctgaggaagattcactgtttttgcttgatgccaccgatccatttagc
gttccagatcgcttgagggaacgagttgcagagtttgagggtcactatacagggcgctta
aatcaaaataagagagtcttggacaacaacccagatccgacaaaagaaagtttatatgat
tattttgctcagattctggagcagtatggtcctctggaggtgtccaacccactgctggtg
ggtgaactggagaactttccgcttgaagctcagcagaagattgagggggctggaggactt
gaagcttttctactcgagtctcttcggtttgtgatgaatgaaaaccgtatcggactgact
aggcatgcggtcaccctgcagaacagtatggctgacgatgccagtgctttccctgactgt
gttcctcatactttcggcactgagactttggagtttagaggatcctactatctcgatccc
acagcaagagagtttcttccacagtatgagcatttcagtgaccgtaacgcgtcttgtgac
attcccggtattttgagtgatgaagacagctctgcatcaggactgtgtgaacccacgctg
cctgatccatatgttttggaatctcagcaggctcgtaatggtgattgcatgtttgtacca
gaagatacaagcatgttcgctgctttttcatctggtttaacagttccggagtgttcgggg
tacgtccatggctcagaactgaacttctataactctgcctacccccctgaaatgaacagt
attaatgcatgcagtgagaaaggaggaggacagccatgttcagagattattcgtaacgaa
gctaaaaaatctgaaaataaaacaatttctgtgcagacgtttggttataacaaagacacc
aaagatgatgtggccgttaatacagaaccgtgtgcgttgttggaaaggaataagggtgat
atgatcctgaaagagaaaaacaacataaaacttgaaaagtgcatccaaaatgcgaaggac
acacgttcgtctcgccagataacaagaaaggaagaactttctgtactggaggcccaagtg
aaggaagcccaacagaaaatagagattaccaacaaagagctcagcttattccaacaaaag
cttgaggaggagatccgaaaagatcagcaggagaaaaaacacaaccaagagacccttaaa
accttgaagggggagatcaaagagttgttagatttgcaggagagttacactaagcaaatc
caggataagaatgaggagtatcaaaccgcgctgaatcagttctgtgcaataagtaatcag
tctgctgctgagaagatgagtttggaggaggagatcaagagacgcagagatgtgtgcgcc
aaagcatctaatcgatcagtggcagcacagctgtccgtcctgcaaaacaagcgggagaat
ggtttgcgcaagttaaagaagtgcgtgggagacgggaaagccattctacagaacatgaca
gaactgtcatccagatatccatctggaagcctcttctccacaatcgaagcctggaaatca
tgtgtgctggaagctgaagaaaagatcagaaggacaagggcacaatatgaagaacaaatt
gagctactgaagaagggtaccaaactgtgctcgcttcctccagtctcagtacccaacgct
cctgctcctcctcctttaccggctttcttaaacacaccatccaatcagcagcaagttcca
cagcagtttcctgtggggcacaggcagccacatgcaccatacagtgtgaatcaacatcct
gtgagaccccaaatgcactcagcagtgtacgtacccctggctccacctgcagagagaatt
gtgcgcacacagccagcacccagcgttcctgccactcgtgtggaggctcctcagaaaccg
gctgctcctgcgccagctcctgctcaagcttctgctccagccccagtccagcaacacctc
agtgtgtttgagaagatcatagaccacctgagcttgatgtttcctcactattccagggcg
gtcctaagcaagtttattcaggaggtccgcaatgctagtgggagcctgaaccagctgaca
tatgaggaagtgatcaacagagtcacacaactcatccttgaccatcaggacgagtcacga
gagcagattagtttggtgagaagggctggtgtgagggagaatgtagttcccagtccaact
cccagcggagactcgagcagagctactcccactccaccccctgcacatgtctggaagagt
gtgtcttctcatcagcgcggcacctccaaagctctgaatatggaagatccctgtattatc
tgtcatgaggatatggcaactgaagatctgtgtgtgctggagtgtcgccatagcttccac
agagagtgtataaagtcatggctgagggagcagagcacctgtccgacctgcagagagcat
gccctcctacctgaggatttccccatgttgcctggacgacatcacagaggacacacatct
gcagcatcctcatcttaa
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integrated database retrieval system
