Astyanax mexicanus (Mexican tetra): 111194086
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Entry
111194086 CDS
T05042
Symbol
cd40
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5 isoform X1
KO
K03160
tumor necrosis factor receptor superfamily member 5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04060
Cytokine-cytokine receptor interaction
amex04514
Cell adhesion molecule (CAM) interaction
amex04620
Toll-like receptor signaling pathway
amex04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111194086 (cd40)
04514 Cell adhesion molecule (CAM) interaction
111194086 (cd40)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111194086 (cd40)
04672 Intestinal immune network for IgA production
111194086 (cd40)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
amex04050
]
111194086 (cd40)
04090 CD molecules [BR:
amex04090
]
111194086 (cd40)
Cytokine receptors [BR:
amex04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
111194086 (cd40)
CD molecules [BR:
amex04090
]
Proteins
111194086 (cd40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
TNFR_ELAPOR1_6th
MLANA
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
111194086
NCBI-ProteinID:
XP_022532927
Ensembl:
ENSAMXG00000041127
LinkDB
All DBs
Position
13:complement(3488644..3498525)
Genome browser
AA seq
299 aa
AA seq
DB search
MRTIFSICLLVLPVVVLCCDETTHYRKDEQCCKLCGPGTRMMKDANCHDPMCQLCMDGEY
QDEYTKETKCKLQPICDINLEFEAPTQQSKTTREPCVCRADHHCSSQDCISCVQNTVCPP
GQKIDIEGNRKLDTTCEPCPPRTYSSGNSTKNCKEWTECSLGYVEAAAGTSTSDRICEAQ
PNIRLGLGILSGFVIILVIMFGGFCWYKRERKGSACLEKKLQQHCPALFKVIAIDEPTAT
VPMQPVEADGNEPTEDTEDQPFTHGVSDNGMPILQDHSKTSVLSVSETQPSSQSFTDRL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaggacaatcttcagtatttgtcttttggttctgcctgtggtggtcctgtgctgtgat
gagactacacactacaggaaggatgagcagtgctgcaaattgtgcggcccaggcacccga
atgatgaaggacgcgaattgccatgatccgatgtgtcagctgtgtatggatggagaatac
caggatgaatatacaaaggaaactaaatgcaaactgcagcctatctgtgacatcaaccta
gagtttgaagcacctacccagcagagtaagaccacacgcgagccgtgtgtgtgccgcgct
gatcatcactgctccagccaggactgcatatcctgtgtccaaaacactgtgtgccctcct
ggacagaagattgacatagagggcaacaggaagttagacacaacgtgtgaaccctgtcct
ccacggacatattcctctggaaattctactaaaaactgcaaagaatggactgagtgctct
ttaggttacgttgaagcagcagcaggcacttccacatctgaccggatttgcgaggctcag
cctaatataagactgggtttggggattctctctggattcgtaatcatccttgtgatcatg
tttggaggtttttgctggtacaaaagagagagaaagggatctgcgtgtctggagaaaaag
ttacagcaacactgtcctgctttatttaaggtcatcgccatcgacgagcccaccgcgacc
gtgcccatgcagccggtggaagcggacggcaacgagcccacggaggacaccgaggaccag
cccttcactcacggcgtgtccgacaatggcatgcccatccttcaggaccacagcaaaacc
tccgtcctttctgtttctgagacgcagccctcatcgcagagcttcacagatcgcctgtag
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