Astyanax mexicanus (Mexican tetra): 125782208
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Entry
125782208 CDS
T05042
Symbol
tcf3b
Name
(RefSeq) transcription factor 3b isoform X1
KO
K09063
transcription factor E2-alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
125782208 (tcf3b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
125782208 (tcf3b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
SpoIIIAH
DDHD
Motif
Other DBs
NCBI-GeneID:
125782208
NCBI-ProteinID:
XP_049321495
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All DBs
Position
16
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AA seq
653 aa
AA seq
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MNEQQDHTMAVETDKELSDLLDFSAMFAPPVANGKNRPTTLASSQFSGSGLDERSSSSPW
AAGEQGSPSFNQERSYVEGSHYSEHDGLSSPFLSSGIGGKNERGPYSTFSSQPGFLPSDI
VMTSADAMSPSGLKSGSQFYPSYGSNPRRRPPDGSIDTQPKKIRKPPGLPSSVYASTSGD
EYPRDGVGYPGSKTGPVYPGSFYMQEGLHPSSDPWAPSGPLGQSGYSAMLGNSPHISQPG
SFTAINPQDRMKRQPLPLSPQNYPLHGADVNGFHSGSGSYNHTSSINGTDSIMASRSSAT
GSSGDEIGKALASIYPSDHNSNNFPSTPSTPVGSPQGIAGATQWPRPAGQTALSPSYEGG
LHALQNKMDDRLEEAIHVLRSHAVGGAHSEVHSLLGAVSSSVHNGALGGLSQSFSSAGLA
LGNRHPSMAASHHNDPACLPPSTSLLQTSHASGTPQPAGAPEGFSSLPGGLASNSADIKR
EDKEDDENSSVADKSEDDKKDTKGSRNKPRKEAFSLQTLSSVSDQGEDQDEDDEDLPAEV
KVEREKERRVANNARERLRVRDINEAFKELGRMCQLHLSTDKPQTKLLILHQAVNVILNL
EQQVRERNLNPKAACLKRREEEKVSGVVGDSQMQLSGAHPALGGDGHNPVSHI
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcagcaggaccacacaatggcggtcgaaacagataaggaactcagcgacctc
ttggattttagtgcgatgtttgcgccccctgtagccaatggaaagaaccggccaaccacg
cttgccagcagtcaattcagtggctcaggcttggacgagcgcagcagttccagtccttgg
gctgctggagagcagggcagcccttcattcaaccaggaacggagttatgttgagggctca
cactacagcgagcatgatgggctatcttccccattccttagctcagggattggcggtaag
aatgaaagagggccttactccacatttagttcacagcccgggttcctgccttcagacata
gtgatgaccagtgcagatgccatgtctccctcaggcctgaagtctggctctcagttttac
ccctcatacggcagtaacccccgcagacgccctccagatggaagcattgacactcagcca
aaaaagattcggaagcctccaggactaccgtcttctgtctatgcctccacgtctggtgat
gagtatccccgggacggcgtgggttatccaggctccaaaacgggtcctgtgtaccctggc
tcgttctacatgcaagagggtctgcacccatcatctgatccctgggcaccctctggacct
ctgggccagtcaggctactcagccatgctgggtaactcgccccacatcagccagcctggc
tccttcactgccatcaatccacaggacaggatgaagcgccagccgctgcctctgtccccg
caaaactaccctctacacggagctgacgtcaacgggttccactcaggctccggatcttac
aaccacacgtcctccattaatggaacagacagcattatggccagtagaagctcagccaca
ggcagctcgggggatgagattggaaaagctttggcttcgatctacccatcagaccacaac
agcaacaatttcccctccacgccttccactccagttggttccccccagggcattgcaggt
gctacacagtggccaagacctgcaggccagacagctctttcacctagctatgaaggtgga
ctacatgcacttcagaacaaaatggatgaccgcctggaggaggcaatccatgtgctgcgc
agtcatgcggttggtggggcccactcggaagtgcacagcctattgggtgccgtgtcctcg
tccgttcataacggagctctgggaggcctctctcagagcttttctagtgctggactagct
ctgggtaacagacatccttccatggctgcaagccaccacaatgaccctgcatgccttcct
cctagcaccagcctattacagacatcccatgcctcaggcaccccacagcctgcaggagca
ccagagggtttcagcagtttgccaggaggcttagcctcaaacagtgctgacatcaagagg
gaagacaaagaagacgatgagaactcctcagtggcagataagtctgaagatgacaagaag
gacaccaaagggtctcgcaacaagcccagaaaggaggcgttttccctccagactctttca
agtgtttcagaccagggagaagatcaagatgaagacgatgaagacctgccagctgaggtg
aaagtagagcgagagaaggagagaagggtggccaataatgcgcgagagcgactgcgcgtg
cgtgacatcaacgaggccttcaaagaacttggccgaatgtgtcagctgcacctgagcacg
gacaaaccacagaccaagctgctgatcctacaccaggctgtcaacgtcatcctcaacctg
gagcagcaagtgcgggagcgcaatctaaatccgaaggcagcgtgtctgaagcgacgggag
gaagaaaaggtgtctggtgtggtgggcgactctcagatgcagctgtcgggagcccaccct
gcattgggaggagatgggcacaatcctgtcagtcatatatga
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