Astyanax mexicanus (Mexican tetra): 125787173
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Entry
125787173 CDS
T05042
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
125787173 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
125787173 (mmp2)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
125787173 (mmp2)
Peptidases and inhibitors [BR:
amex01002
]
Metallo peptidases
Family M10
125787173 (mmp2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
DUF4953
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
125787173
NCBI-ProteinID:
XP_049326974
LinkDB
All DBs
Position
23:complement(9418960..9447113)
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AA seq
652 aa
AA seq
DB search
MRCFRHLVLRAFLLQILASLETLSAPSPIIKFPGDVTVPRTDKEVALHYLNKFYGCPEDR
CNLMVLKDTLKKMQKFFALPETGEIDQKTVEIMKKPRCGVPDVANYKFFHRSPKWEKKDI
TYRILGHTPDLDEETTDDAFFRAFKVWSDFTPLTFTRITEGEADIMINFGRNEHGDGYPF
DGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGDGQVVKVKFGNAEGEFCKFPFLFMGTEY
NSCTSQGRDDGFLWCSTTYDFDKDQKYGFCPHELLFTLSGNGDGAPCKFPFTFQGEKYDS
CTTSGRDDGYRWCATTEDYDRDKTYGFCPETAMSTVGGNSEGAPCVFPFTFLGNSYDSCT
TSGRSDGKMWCAVTKSFDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSEDPGALMAPI
YTYTKNFRLSNDDIKGIQTLYGVPTDKPLPPTQGPVTPMDICNENIIFDAIAQIRGEIFF
FKDRFIFRTANPHTKPSGPLLVATFWSELPEKIDAAYENPLEEKTVFFAGDEMWVYSAST
LERGYPKKLSSMGLPTDLHRIDAAYSYHKSKKTYLFSGEKFWRYNEAKKKMDPGFPKLIA
DSWNGLPDDLDAAFSMNGKGHSYFFKDSHYLKMDESLKIIKVGEVKKDWLRC
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgcttcaggcatttggtcctcagagcgtttctgctgcagatcctcgcttctctg
gaaactttgtctgcgccctcgccgattatcaagttccccggagatgttactgtaccgcgc
acagacaaagaagtagcgctgcactatctgaataagttctatggctgcccagaagacaga
tgcaacctgatggtgctgaaggacacactgaagaagatgcagaagttcttcgctctcccg
gagacgggcgaaatcgaccagaagaccgttgagatcatgaagaagccccgctgtggagtg
ccagacgtggccaattacaaattcttccacagatcacccaagtgggaaaagaaggacatt
acatacaggatcttgggacatactcctgacttggacgaggagacgactgatgatgcattc
ttccgtgcttttaaagtctggagcgacttcactcctctcaccttcacacgcatcacggaa
ggagaagctgatatcatgattaactttggccgcaacgagcatggtgatggttatccattt
gatgggaaggacggactcctggctcatgcgtttgcgcctggacccgggattggaggcgac
tcccactttgacgatgatgagcagtggactctgggagatgggcaagttgtgaaggtgaag
tttgggaatgcagaaggcgagttctgcaagttcccgttccttttcatgggcacagaatac
aacagctgcacatctcagggacgtgatgatgggttcctctggtgctctacaacctacgac
tttgataaggatcagaagtacggcttctgcccacatgagttgctgtttacactgagtgga
aatggagatggagccccatgcaagttccccttcaccttccaaggggaaaaatacgacagc
tgcaccacctcaggtagagatgatggttaccgttggtgtgccactactgaggactatgac
cgggacaagacatacggattctgccctgaaactgcaatgtccactgttggaggtaactca
gaaggtgctccctgtgtcttccccttcaccttcctgggcaactcgtacgactcgtgcacc
acctctggtcgtagtgatgggaaaatgtggtgtgctgtcaccaagagctttgatgatgat
cgcaagtggggcttctgtcctgatcaaggttacagtctcttcctggtggcggctcatgag
tttggtcatgctttgggtctggagcactctgaggaccccggcgcactcatggctcccatc
tacacctacaccaagaactttaggctttctaatgatgatatcaaaggcatccagaccctc
tacggtgtgccaacagataaacccctcccacccactcagggtcctgtcacgcctatggat
atctgcaatgagaacatcatatttgatgcgatagcacagatcagaggagagatcttcttc
tttaaagacaggttcatcttcaggactgctaatccacacactaagccgtcagggccgctg
ctggtggccacgttctggagtgagctccctgagaagatagacgctgcctatgagaaccct
ctggaggagaagaccgtgttctttgcaggtgatgaaatgtgggtgtattcggccagtact
ctggagaggggctaccctaagaagctctcctccatgggattaccaacagacctgcaccgt
atagatgcggcctactcctaccacaagagcaagaagacctacttgttctccggagaaaaa
ttctggaggtacaatgaagccaagaagaagatggatccaggctttcccaaactcattgct
gattcctggaatggcttacctgacgatttggacgctgcgttcagtatgaacggaaagggc
cacagctacttcttcaaagactcccactatctgaaaatggacgagagcctgaagatcatc
aaagtgggagaggtcaaaaaggactggctgcgttgctga
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