Alligator mississippiensis (American alligator): 109281824
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Entry
109281824 CDS
T03087
Name
(RefSeq) interstitial collagenase-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
109281824
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amj01002
]
109281824
Enzymes [BR:
amj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
109281824
Peptidases and inhibitors [BR:
amj01002
]
Metallo peptidases
Family M10
109281824
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
Reprolysin_3
Astacin
DUF4953
PG_binding_1
Reprolysin_5
Reprolysin_4
Peptidase_M66
Metallopep
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
109281824
NCBI-ProteinID:
XP_019337497
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All DBs
Position
Un
AA seq
400 aa
AA seq
DB search
MQLFLGLEVTGKYDDETTKMMKQPRCGMPDIGNYVLTEGHPKWSTNDLTYRIINRTPDMR
PADVDEAIKQAFEVWSNVTPLTFRRIEDGEADIMISFQYRDHGDNSPFDGPNGILAHAFQ
PGLRIGGDVHFDEEETWTKDSRGYSLFNVAAHELGHSLGLSHSTDPGALMFPTYTYVDPK
EFHLHQDDINGIQAIYGPSLKPVQPTGHSTPEACNPNLSFDAVATLRGEMLFFKDRFFWR
KHPQRMDNGFNIISDFWPTLSSGIQAAYENVEKDQVVVFKESKYWVLNGFDIAYGYPKRI
HQLGFPRTVKRINAVFSDENTRKTYFFVNDKYWRYDENTQSMDKGYPRKIIKDFGITGKV
DAVFQHEDYIYFFRGTNQYQFDPKTKRVVRILRSNSWFTC
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcagttatttttgggactggaagtgactgggaagtatgatgatgagactacaaagatg
atgaagcagccgagatgtggtatgcctgacattggcaactatgttctaacagaagggcat
ccaaagtggtcaacaaatgacttgacatacaggattataaaccgcacacctgacatgaga
ccagctgatgtggatgaggctataaaacaagcatttgaagtctggagtaatgtaacacca
ctgacattcagaagaatcgaggatggagaagcagatataatgatctcttttcaatatagg
gatcatggggacaattctccctttgatggacctaatgggatactagctcatgcttttcag
cctggcctccggattggtggagatgttcactttgatgaggaggaaacttggacaaaagac
agtaggggctacagcttgttcaatgttgctgcccatgagttgggtcattccttgggtttg
tctcattctactgatcctggtgccttgatgttcccaacctatacctatgtggaccctaaa
gaattccacctccatcaggatgatattaatggcattcaagccatctatggaccatctctg
aaacctgttcaaccaactggacactcaactccagaagcttgcaaccctaatttgtctttt
gacgctgttgctactctgcgtggagaaatgttgttctttaaggacaggtttttctggcgc
aagcatccccagcgaatggacaatgggttcaatattatttctgatttctggccaacccta
tcatctggaattcaagctgcttatgaaaatgttgaaaaagatcaagttgttgttttcaaa
gagagcaaatattgggttctcaatggatttgatatagcctatgggtaccctaaaagaatc
catcagctgggctttccaaggactgttaaaagaattaatgcagttttcagtgatgagaat
accaggaaaacatatttctttgtaaatgacaagtattggagatatgatgaaaacacacaa
tctatggataagggttatccaaggaaaataatcaaagactttggaataactggcaaggtg
gatgcagttttccagcatgaagactatatctatttcttccgtggaacaaaccagtaccag
tttgatcctaagaccaagcgagttgtcaggatcctgaggagcaacagctggtttacttgt
taa
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