Ailuropoda melanoleuca (giant panda): 100478167
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Entry
100478167 CDS
T01329
Symbol
MMP1
Name
(RefSeq) LOW QUALITY PROTEIN: interstitial collagenase
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03320
PPAR signaling pathway
aml04657
IL-17 signaling pathway
aml04926
Relaxin signaling pathway
aml05171
Coronavirus disease - COVID-19
aml05200
Pathways in cancer
aml05219
Bladder cancer
aml05323
Rheumatoid arthritis
aml05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
100478167 (MMP1)
09152 Endocrine system
03320 PPAR signaling pathway
100478167 (MMP1)
04926 Relaxin signaling pathway
100478167 (MMP1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100478167 (MMP1)
09162 Cancer: specific types
05219 Bladder cancer
100478167 (MMP1)
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
100478167 (MMP1)
09163 Immune disease
05323 Rheumatoid arthritis
100478167 (MMP1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100478167 (MMP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aml01002
]
100478167 (MMP1)
Enzymes [BR:
aml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
100478167 (MMP1)
Peptidases and inhibitors [BR:
aml01002
]
Metallo peptidases
Family M10
100478167 (MMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_3
Reprolysin_4
Peptidase_M66
DUF4953
Peptidase_M54
Metallopep
Motif
Other DBs
NCBI-GeneID:
100478167
NCBI-ProteinID:
XP_034521538
Ensembl:
ENSAMEG00000010172
LinkDB
All DBs
Position
8:complement(968130..975560)
Genome browser
AA seq
466 aa
AA seq
DB search
MPSLLVPLLLLCGVGSLGFPTATPGAQDQDVRTVQKYLENYYNLKSDGKQIVRQRNSSLV
TEKLKQMQEFFGLKVTGKIDADTLSVMKQPXCGVPDVAQYVLTDRTPRWEHTHLTYRIEN
YTPDLPRADVDSAMEKAFRLWSNVSPLTFTKIFEGQADIMISFVWGDHYDNSPFDGPNGN
LAHAFPPGPNLGGDAHFDEDETWTNDYRNYNLYRVAAHELGHSLGLSHSTDIGALMYPNY
MYDGDVQLSQDDISAIQAIYGPSPNPVQPTGPQTPQVCDSNLVFDAITTVRGEVMFFKDR
FYMRQNPFYPEVELNFISTFWPNLPSGLQAAYEFAERDEIRFFKGDKYWAAQGQEMLYGY
PKDIYRSFGFPQTVKNIDAAVSDEESGKTYFFVANKYWRYDEYKRSMDAGYPRAIATDFP
GIGHKVDAVFQKYGFFYIVHGTTQYKFDLQTKRILSIDRVNSWFNC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccttcttgtgccgctgctgctgctctgcggcgtggggtccctcggcttcccg
acagccaccccgggagcccaggaccaggacgtgcggacggtgcagaaatacctggaaaac
tactacaatctgaagagcgatgggaagcagatcgtaaggcagaggaacagcagcttggtg
actgagaagctgaagcaaatgcaggaattcttcgggctgaaggtgaccgggaagatagat
gctgacaccctgagtgtgatgaagcagcccnnatgtggggtgcccgacgtggctcagtac
gtcctcactgacaggaccccccgatgggagcacacacacctgacctacaggattgaaaac
tacaccccagatttgccaagagcagatgtggacagtgccatggagaaagcctttcgactc
tggagtaacgtctcgcccctgaccttcaccaagatctttgagggtcaagcagacatcatg
atatcctttgtctggggagatcactacgacaattctccctttgatggacccaacggaaac
ctcgctcatgcgtttccaccaggcccaaatcttggaggggatgctcatttcgatgaagat
gaaacatggaccaacgattacagaaattacaacctgtatcgtgtggcggcccacgagttg
ggtcattcccttggactttctcattctactgatattggggctctgatgtaccccaactac
atgtacgatggtgatgtccagctctctcaggatgacatcagtgccatccaggccatatac
ggaccttccccgaatccggtccagccaacaggcccccaaacaccacaggtgtgtgatagt
aacctagtctttgatgctatcactacagttcggggagaagtgatgttctttaaagacagg
ttctacatgcgccaaaatcccttctacccggaagttgagctcaatttcatttctactttc
tggccaaacctgccaagtggacttcaggcagcttatgaatttgctgagagagacgaaatc
cggtttttcaaaggtgataagtactgggctgctcaggggcaggaaatgctgtacggatac
cccaaggacatctacagatcctttggcttccctcaaactgtgaagaacatcgatgctgct
gtttctgacgaagaaagtggaaaaacatacttctttgttgctaacaagtactggaggtat
gacgaatataaacgatccatggatgcaggttatcccagagcgatagcaactgactttcct
gggattggccataaagttgatgctgttttccagaaatacggctttttctatatcgttcat
ggaaccacacaatacaaatttgatcttcaaactaagagaattctgagtattgacagagtt
aacagttggttcaactgctga
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