Aminobacter niigataensis: AMD1_PA0034
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Entry
AMD1_PA0034 CDS
T09606
Name
(GenBank) Type I secretion outer membrane protein, TolC precursor
KO
K12340
outer membrane protein
Organism
anj
Aminobacter niigataensis
Pathway
anj01501
beta-Lactam resistance
anj01503
Cationic antimicrobial peptide (CAMP) resistance
anj02020
Two-component system
anj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AMD1_PA0034
09132 Signal transduction
02020 Two-component system
AMD1_PA0034
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AMD1_PA0034
01503 Cationic antimicrobial peptide (CAMP) resistance
AMD1_PA0034
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anj02000
]
AMD1_PA0034
02044 Secretion system [BR:
anj02044
]
AMD1_PA0034
01504 Antimicrobial resistance genes [BR:
anj01504
]
AMD1_PA0034
Transporters [BR:
anj02000
]
Other transporters
Pores ion channels [TC:
1
]
AMD1_PA0034
Secretion system [BR:
anj02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
AMD1_PA0034
RTX toxin transporter
AMD1_PA0034
Multiple protein transporter
AMD1_PA0034
RaxAB-RaxC type I secretion system protein
AMD1_PA0034
Antimicrobial resistance genes [BR:
anj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
AMD1_PA0034
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
AMD1_PA0034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
CAI2936468
LinkDB
All DBs
Position
paAMD1:complement(45404..46747)
Genome browser
AA seq
447 aa
AA seq
DB search
MSYCRTAVAVLSACVALAGCANGAVRQVSAPATGKVVTGSVGSNLASINTHPEILAADAR
RDAAGEEIARARSTLLPSAGIEASAGVAAGDGDEFDNRTTGNAYSYALTVDIPLYQGGRG
QSAVAAAKADYRASGEVANDRRVSAAYELALALIEVHRQKGAVVILGKQAAILASLKGGI
ETELKAGAASRVDVDDVGRQLSRLSVERERARLLIAQASRTALRLGIAPETKLPEVSKLY
LPSEEQDLIELAVKNNPRVKERDARADAAKARVNQAKGDLLPTVSAGLSVRGGEDTLPGV
DRHVAGRGEVRFSMPIYTGGRVSAGIRQRNDENRAAVFEADAARIGVTAAIRSAFDRRVL
ARRMQTLAQAERRNAASALEGVRAERKVGERSTFDEIRAIADLANSEINLNNARYDLIAA
EYTIAAETGLIGELFGVPGVQQTAVAE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcttactgcagaacggctgtagcggtgttgagtgcctgcgttgcgcttgcagggtgc
gccaacggcgctgtccgccaggtttccgctcccgcgaccggcaaggttgtgactggcagc
gttggcagcaacctcgcgtcgatcaatacccatccggaaatactggcagccgatgcacgg
cgcgatgcggccggcgaggagattgcgcgcgcgcggtcgaccctgctgccaagtgccggc
atagaggcgagcgccggggttgcggctggcgacggcgacgaattcgacaaccgtacgacc
ggcaatgcctattcctatgcgctgacggtcgacatcccgctctaccagggcggcagggga
cagtccgccgtggctgctgccaaggcggattaccgcgccagcggcgaggtggccaatgac
aggcgtgtctccgccgcctatgaactggcgctggcgctgatagaagtccaccgccagaag
ggcgccgtggtgatccttggcaagcaggcagccattctcgccagcctgaaaggcggcata
gagactgaattgaaggcaggcgcagcaagtcgcgtcgacgtcgacgacgtcgggcgtcag
ttgtcgcgcttgtcggtcgagcgtgagcgcgccaggctgttgattgcccaggcaagccgc
acggcgctgcggctcgggatcgcgcccgagacgaaactgccggaggtctcgaagctctat
ctgccgagcgaagaacaagacctcatcgaactggctgtgaaaaacaatccgcgcgtcaag
gaacgcgatgcccgcgccgatgcagcaaaggcccgggtcaatcaggcaaagggcgatctg
ctgccgaccgtgtccgcggggctgagcgtgcggggcggcgaggacacgcttcccggcgtc
gatcgccatgtcgcgggtcgtggtgaggtgcggttctcgatgccgatttacacgggtggc
cgtgtcagtgccggtatcagacagcgcaacgatgaaaaccgcgccgcggtgttcgaagcc
gatgccgcgcgaattggcgtgactgccgcaatccggtccgcattcgaccgccgtgtactg
gcaaggcgcatgcagaccctggcccaggcggaacggcgcaacgccgcctcggccctcgag
ggtgtacgcgccgaacgcaaggtcggcgagcgctcgaccttcgacgagatcagggcgatt
gccgacctcgccaattcggaaatcaatctcaacaatgcgcgctacgacctgatcgccgcc
gagtacacgatcgcggcggaaacgggcctgattggcgaactcttcggcgtaccaggcgtc
cagcagactgcggttgccgaatag
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