Anaerocolumna sedimenticola: Ana3638_19640
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Entry
Ana3638_19640 CDS
T06399
Name
(GenBank) HAMP domain-containing protein
KO
K18345
two-component system, OmpR family, sensor histidine kinase VanS [EC:
2.7.13.3
]
Organism
anr
Anaerocolumna sedimenticola
Pathway
anr01502
Vancomycin resistance
anr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Ana3638_19640
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Ana3638_19640
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
anr01001
]
Ana3638_19640
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
anr02022
]
Ana3638_19640
01504 Antimicrobial resistance genes [BR:
anr01504
]
Ana3638_19640
Enzymes [BR:
anr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Ana3638_19640
Protein kinases [BR:
anr01001
]
Histidine kinases
OmpR family
Ana3638_19640
Two-component system [BR:
anr02022
]
OmpR family
VanS-VanR (VanB type vancomycin resistance)
Ana3638_19640
Antimicrobial resistance genes [BR:
anr01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Ana3638_19640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
HATPase_c_2
Sigma_reg_N
Microp_apicomplexa_16
Motif
Other DBs
NCBI-ProteinID:
QHQ62715
UniProt:
A0A6P1TTE9
LinkDB
All DBs
Position
complement(4416132..4417700)
Genome browser
AA seq
522 aa
AA seq
DB search
MKVRLKNINRHSIRFKLTFTLTLIIILTIFTLWFLNRTLLEDYYIHSKINTLGKTYDEVN
DIFKNSNDKNTTSNQDKLKLERFVESRNVSIYIIAHTAWFDRSEWVPFDEDKDNGNNKNN
EKNERYAQILQLIKGYIFGEVNPQVKSKDLVKSTNNYNIFKTFDPRIESNYVDLIGNLEG
GNIVFIRTNLESMRESVEVANKFLAYVGMISVVIASIVMFYISRRFSKPILQLAGISKRM
SDLDFDAKYFVTSQDEIGELGSSINTLSEKLEKTISELKSANNELLSDIQNKIQIDEMRK
DFLSNVTHELKTPIALIQGYAEGLKDNINDDEDSRDFYCEVIVDEAKKMNEMVKKLLSLN
QIESGNNQVNIERFDIVALIQSVLDSAEILIQQKEVLLHFEQKEPIYVWADEYMVEEVVT
NYVSNALNHVDGAKIIEIKLIQKEDAVRVAVFNTGANIPEEDLDKIWIKFYKVDKARTRE
YGGSGIGLSIVKAIMSSLNQECGVINHETGVEFWFELDTKIN
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttcgtttgaaaaatataaaccggcattctatacggtttaaattaacctttacc
ctgacgcttatcataatattgacaatctttacgttatggtttttaaacagaacgctttta
gaagactattatattcatagtaaaattaataccttgggaaaaacttacgatgaagttaat
gacatttttaaaaacagtaatgataagaatactacctcaaaccaggataaattaaaactg
gagcgatttgtagaaagccgtaatgtcagtatctatattattgcacacaccgcttggttt
gaccgctctgaatgggtgccttttgatgaagataaggataacggtaataataaaaataat
gaaaaaaatgaaagatatgcccagatacttcaattgatcaagggttatatttttggtgaa
gtaaatccgcaggtcaaatcaaaagaccttgtaaagagtacgaacaattataatattttt
aagacttttgatccccgcatcgaatccaattacgtggatttgattggtaatttagaggga
ggaaacattgtatttatacgaacgaatttggagagcatgcgggaaagtgtggaagtggcg
aataaatttttagcttatgttggaatgatatccgttgtaatagcttctattgtcatgttt
tatatcagcagaagattctctaagccaatcctgcagcttgcaggcatttccaaaagaatg
agtgatctggattttgatgcaaaatattttgtaacatcccaggatgaaataggagagctt
ggcagcagtattaatacgttatcggaaaaactggaaaaaaccatatcggaattaaaaagt
gctaataatgagctgctttccgatattcagaacaagatacagatagatgagatgcgaaaa
gatttcttatccaatgtaacgcacgaacttaaaaccccaattgctttaatccaggggtat
gcggaaggtttaaaagacaatattaatgatgacgaagacagcagggatttttactgtgag
gttattgttgatgaagcgaaaaaaatgaatgaaatggttaagaaattattgtccctgaat
cagattgaatccggtaataatcaggttaatattgaacgttttgatattgttgccttaatt
caatccgtactggattcagcagaaatattgattcagcaaaaagaggtattacttcatttt
gagcaaaaagaacctatctatgtatgggcagatgaatatatggtggaggaagtagttacg
aattatgtcagtaatgccctaaaccatgtggacggagctaaaataatagagataaaactg
atacaaaaggaggatgcggtacgggttgccgtatttaatacgggtgctaatatacctgaa
gaagatcttgataagatatggattaagttttataaggtggataaagccagaaccagggaa
tatggaggaagcggcattggtctttctatagtaaaagcaatcatgtcttccttaaatcag
gagtgtggtgtaattaatcatgaaacaggtgttgaattctggtttgaattggatacaaaa
ataaattaa
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