Malaciobacter pacificus: APAC_1341
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Entry
APAC_1341 CDS
T06712
Name
(GenBank) RND family efflux system, outer membrane channel protein, TolC family
KO
K12340
outer membrane protein
Organism
apai
Malaciobacter pacificus
Pathway
apai01501
beta-Lactam resistance
apai01503
Cationic antimicrobial peptide (CAMP) resistance
apai02020
Two-component system
apai03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
apai00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
APAC_1341
09132 Signal transduction
02020 Two-component system
APAC_1341
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
APAC_1341
01503 Cationic antimicrobial peptide (CAMP) resistance
APAC_1341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
apai02000
]
APAC_1341
02044 Secretion system [BR:
apai02044
]
APAC_1341
01504 Antimicrobial resistance genes [BR:
apai01504
]
APAC_1341
Transporters [BR:
apai02000
]
Other transporters
Pores ion channels [TC:
1
]
APAC_1341
Secretion system [BR:
apai02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
APAC_1341
RTX toxin transporter
APAC_1341
Multiple protein transporter
APAC_1341
RaxAB-RaxC type I secretion system protein
APAC_1341
Antimicrobial resistance genes [BR:
apai01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
APAC_1341
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
APAC_1341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QEP34455
UniProt:
A0A5C2HAA9
LinkDB
All DBs
Position
1342778..1343971
Genome browser
AA seq
397 aa
AA seq
DB search
MKRIIILPFLCSSLFSNELELLQKDKQEIRTLEKQIIEEKYKSSKDEWIGRIDLSSTINR
THSFSSENDNLSKSISIGFSQNIYQSGGIEFSIQNAKDTYNQDLISWENENIAILQTIYE
TLLNMKKVKIQIAQSDYNLKNKHIELILKKIQYEAGKVDIVELNNAIMSKNTQFKNTISL
KNSLKDLEHELSKYTSLRYDEIEILDFKHINKEKFIKNSLDLKYEKSKIDVLNTTYKELK
SSYGPQVSISTNASYSNNDDLTNNTNDDSSSGSISLKLSMPIFDITKDTKIEKSKLEVLK
QKVSLNDTKNELDYTYEQIINQIDTYEQYRKTISENLELYNDLISVNATSNSAGMTSDYD
LEILKNTKQINEFDLKINDINIKLQYSKLYFMTKAKS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
ttgaagagaataataattcttccttttttgtgtagttcactattttctaatgaactagaa
ctactacaaaaagataaacaggaaataagaactttagaaaaacaaataatagaagaaaaa
tataaatcttcaaaagatgaatggattgggagaattgatttaagctctactataaataga
actcactctttttctagtgaaaatgataatttatcaaaaagtatttcaattggtttttct
caaaacatatatcaatcgggtggtatagagttttcaattcaaaatgcgaaagatacatat
aatcaagatttaatttcatgggaaaatgaaaatatagcaatacttcaaacaatatatgaa
actttgttaaatatgaaaaaagtaaaaatacagatagctcaaagtgattataatttaaaa
aataaacacatagagttgattttaaagaaaatacaatatgaagctgggaaggtagatatt
gtagaactaaataatgcaattatgtctaaaaacactcaatttaaaaatacaatttcttta
aaaaactctttaaaagatttagaacacgaattatctaaatatacatcattaagatatgat
gaaatagagattttagattttaaacatataaacaaagagaagtttattaaaaatagttta
gatttaaagtatgagaaatcaaaaattgatgttttaaatactacatataaagaattaaaa
agctcttatggtcctcaagttagtatttcaactaatgcatcatattcaaataatgatgat
ttgacaaataatacaaatgatgatagctcatcaggtagtatatctttaaagctatcaatg
cctatttttgatattacaaaagatacaaaaatagaaaaatcaaaacttgaagtacttaaa
caaaaagtatctttaaatgacacaaaaaatgagcttgattacacttatgaacaaatcata
aatcaaattgatacttatgaacaatatagaaaaactatcagtgaaaatttagagttatat
aatgacttgatttctgtaaatgcaacatcaaatagtgcaggaatgacttctgattatgat
ttagaaatactaaaaaatactaagcaaatcaatgaatttgatttaaaaatcaatgatata
aatatcaaactacaatactcaaaactatattttatgacaaaggctaaaagttaa
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