Arcobacter porcinus: APORC_2049
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Entry
APORC_2049 CDS
T06395
Name
(GenBank) RND family efflux system, outer membrane channel protein, TolC family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
apoc
Arcobacter porcinus
Pathway
apoc01501
beta-Lactam resistance
apoc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apoc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APORC_2049
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
APORC_2049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
apoc02000
]
APORC_2049
01504 Antimicrobial resistance genes [BR:
apoc01504
]
APORC_2049
Transporters [BR:
apoc02000
]
Other transporters
Pores ion channels [TC:
1
]
APORC_2049
Antimicrobial resistance genes [BR:
apoc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
APORC_2049
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
APORC_2049
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
APORC_2049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QEP41599
UniProt:
A0A5C2HFC9
LinkDB
All DBs
Position
1984757..1986142
Genome browser
AA seq
461 aa
AA seq
DB search
MFRYIFYFIIAISFVSCTSMQPTLNLEDKEFTKESFKNYEQNRNDNFEEFNSNKFLKDEK
LKTIINLVLENNKSLEIALLKIESSKALYGIQTSNLFPKIDAKGSLDRTKASDYTNPNNQ
ISNNYKANITASFELDLFGKNQSLNDAAKNSFLATKYAYNSTKLILISETINTYLKLASS
LENQKLSNEILKNLEETYSLTSKKYVLGATSKQEMLASLASLKEMENRSLEFENEVAKSI
NALEFLLSSKLDENLMPSEFLKSDYIDTLNYQIESNVLLNRPDIKEFEFKLREKNANIGA
ARAAFFPSISLTASTGYASNSLSGLFSNQNTFWQISPSINIPIFTAGENIKRLEYSKKEQ
EIALKEYEKAIQTAFKEVNDTLAIRKNIASKLENYSLLLESLKDTYNIVLNSYKIGKGSY
LSLLIAQKEYINAKIAYTNLVLSELENRVDIFKTLGGEIKE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtttagatatatattttattttataatagcaatatcttttgtatcttgtacttcaatg
caaccaactcttaatcttgaagataaagagttcacaaaagagtcatttaaaaattatgaa
caaaatagaaatgataattttgaagaatttaatagtaataagtttttaaaagatgaaaaa
ttaaaaactattattaatcttgttttagaaaataataagagcttagaaatagctcttttg
aaaatagagagttcaaaagctctttatgggatacaaacttcaaatctatttccaaaaatt
gatgctaaaggttctttagatagaacaaaagcaagtgattatacaaatccaaataatcaa
atctcaaataactataaagcaaatattacagcatcttttgagcttgatctatttggtaaa
aatcaaagcctaaatgatgctgctaaaaatagttttcttgctacaaagtatgcttataat
agtacaaaacttattttaatttctgaaacaattaatacttatttaaaactagcaagtagt
ttagagaatcaaaaattatcaaatgaaatattaaaaaatttagaagaaacatactcttta
acaagtaaaaaatatgttctaggagctacttctaaacaagagatgttggcaagtttagct
tcacttaaagagatggaaaatagaagcttagagtttgaaaatgaagtagcaaaaagtata
aatgctcttgagtttttattatcttctaaacttgatgaaaatttaatgccaagtgaattt
ttaaagtctgattatattgatactttaaattatcaaatagaatcaaatgttttactaaat
agaccagatataaaagagtttgagtttaaattaagagaaaaaaatgcgaatataggtgct
gctagagcagctttttttccaagtattagtttaactgcaagtacaggatatgcaagtaac
tctttaagtggattattctcaaatcaaaatacattttggcaaattagtccaagtataaat
attcctatttttacagctggtgagaatataaaaagattagaatactcaaaaaaagagcaa
gagatagctttaaaagagtatgagaaagctattcaaacggcatttaaagaggtaaatgat
actttagctattagaaaaaacattgcttctaaattagaaaactactctttacttttagag
tctttaaaagacacttacaatattgttttaaattcatataagattggaaaaggatcttat
ttatctttactaattgcacaaaaagagtatataaacgctaagattgcttatacaaattta
gttttaagtgagttagaaaatagagtagatatttttaaaactttaggtggagagataaaa
gagtaa
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