Aquimarina sp. ERC-38: NBT05_06780
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Entry
NBT05_06780 CDS
T09583
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
aqe
Aquimarina sp. ERC-38
Pathway
aqe01501
beta-Lactam resistance
aqe01503
Cationic antimicrobial peptide (CAMP) resistance
aqe02020
Two-component system
aqe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NBT05_06780
09132 Signal transduction
02020 Two-component system
NBT05_06780
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NBT05_06780
01503 Cationic antimicrobial peptide (CAMP) resistance
NBT05_06780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aqe02000
]
NBT05_06780
02044 Secretion system [BR:
aqe02044
]
NBT05_06780
01504 Antimicrobial resistance genes [BR:
aqe01504
]
NBT05_06780
Transporters [BR:
aqe02000
]
Other transporters
Pores ion channels [TC:
1
]
NBT05_06780
Secretion system [BR:
aqe02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NBT05_06780
RTX toxin transporter
NBT05_06780
Multiple protein transporter
NBT05_06780
RaxAB-RaxC type I secretion system protein
NBT05_06780
Antimicrobial resistance genes [BR:
aqe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NBT05_06780
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NBT05_06780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Tir_receptor_M
Motif
Other DBs
NCBI-ProteinID:
UZO82172
LinkDB
All DBs
Position
complement(1595779..1597419)
Genome browser
AA seq
546 aa
AA seq
DB search
MNELNPLIYSGLTLVKKHCKKQNFLYLVTLISLLITSLQTLVAQNEIPCDLVELSNKALG
INPILLQNKNQILSAEGGIQIQQGVFNPVFLSGISYQDNRSNLFDQDPRNELIDNNLIET
ETIDFTLGLQKTFRNGLFSTLNVDYADVANNFPLNQFNQNVRPFLSNHTFSSTLALTQPL
LRGSGIKVATALEKAAILRSESVQNNYQNESAFQLLQIAVAYWQYTAAFQNWLIYKENED
RVANVLRITKELVKADKKPAGDLVQIQADLANQQRLTNTAFQNFQNSKINLGRAVGLNET
ESEALSIPLNTFPEISTSGVDGALLKDKLLEQALINRNDLQAFQKEKEALMKQVRLAANN
RNPELNLTGFVSYGGTNFGNGIDRAFSAITNKDGSNYTVGVRLNLSLPILNQTARGTYLQ
QKTALDNQEIATDNLERNISLNVNIAVTNVENSASILKKAKETLTYSQEVFTNEQIKFKN
GLTTLLNLILFQERLTFAQLEYQQAQLQFAVAIANLRYETGTLVAFTDSVNTPIISKQQY
YTVPKT
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagttaaatcctttgatatactcaggtttgactttagttaaaaagcattgtaaa
aaacaaaattttctttatttagtaaccctaattagtctactaattacaagcctacaaact
ctcgtagcacaaaatgagattccctgtgacctggtagaactttcgaacaaagctttaggc
atcaatccaatcctccttcaaaacaaaaatcaaatactaagtgccgaaggaggtattcaa
attcaacaaggtgtttttaacccggtttttctttcaggcatttcgtatcaggataaccgg
tctaacctatttgaccaggatccaagaaatgaactaatagataataacctaattgaaact
gaaaccattgattttacattaggtttacaaaaaacattcagaaacggacttttttctacc
ttaaacgtagattatgccgatgtagctaataattttcctttaaaccagttcaatcaaaac
gtacgacccttcttatccaaccatactttctcttctaccttagcgcttactcagccttta
ttacgaggaagtgggattaaagtagctacggcactggaaaaagcggctatccttcgttcg
gaaagcgtacaaaataattatcaaaatgagagtgcctttcaattactgcaaattgccgta
gcctactggcaatacaccgcagcctttcaaaactggttaatttataaagagaatgaagat
cgggtggctaacgtacttcggattactaaagaattagttaaagcagataaaaaaccagcc
ggagacctggtacaaattcaagccgaccttgctaatcaacaacgtttaacgaatactgcg
tttcaaaactttcaaaattctaaaattaacctgggacgagccgtaggactcaatgaaacc
gaaagtgaagccttaagtattcctttaaataccttcccggaaattagcacatcaggagta
gacggtgctttactaaaagataaattactagaacaggcacttatcaaccgtaatgattta
caagcttttcaaaaagaaaaagaagctttgatgaaacaagtacgcttagccgcaaacaat
cgcaatccggaactaaaccttaccggttttgtttcatacggaggtacaaattttggcaat
ggaatcgatcgggcattttcagcgattacgaataaagatggtagtaattataccgtaggg
gttcggttaaacctttcacttcctattctaaatcaaaccgccagaggtacttaccttcag
cagaaaacagctttagataaccaggaaattgctaccgataacctggagcgaaatattagt
ttaaatgtgaatattgctgtgactaacgtagagaattccgcttctatcttaaagaaagct
aaagaaactcttacctattcacaggaagtatttacaaacgaacagattaaatttaaaaac
ggattaaccaccctcctaaatttaatcctatttcaggaacggctcacttttgcccaactg
gaataccaacaggcacagctacaatttgccgtagccattgctaaccttaggtatgaaacc
ggaaccttagtagcatttactgattccgttaatactccaattatttcaaaacaacagtat
tacactgttccaaaaacataa
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