Aquitalea sp. USM4: DKK66_09580
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Entry
DKK66_09580 CDS
T05865
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
aqs
Aquitalea sp. USM4
Pathway
aqs01501
beta-Lactam resistance
aqs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aqs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DKK66_09580
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DKK66_09580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aqs02000
]
DKK66_09580
01504 Antimicrobial resistance genes [BR:
aqs01504
]
DKK66_09580
Transporters [BR:
aqs02000
]
Other transporters
Pores ion channels [TC:
1
]
DKK66_09580
Antimicrobial resistance genes [BR:
aqs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DKK66_09580
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DKK66_09580
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DKK66_09580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QBJ78316
LinkDB
All DBs
Position
2035112..2036506
Genome browser
AA seq
464 aa
AA seq
DB search
MTRMSAFTPSRLALAGLISLLLAGCAIGPDYTRPKMDIPATYKEDGRWKTATPQDAAPRG
NWWAVYQDPQLDSLMDTLNRQSPTIAQAEANYRNARALLDQAEASLWPTISSTASKTRGV
TTAGGSVSNQYNLSASASWEVDLWGTVRRAVEAGNAKEAASAAQLASIRLSSQAQLATAY
LQLVAADVQLKQLQDSEANLLQTLQLTRNQFAVGMVSDDAVAQAESSWKTAQAARVDKQL
SRAQLEHAIAASLGVAPASFTLPVSKTLPHLPQLPAGLPSTLLERRPDIAAAERAVAQAN
AEIGIAKAAFFPTLNLTASGGYKSSSFADWVSLPNRIWSVGPQLALTLFDGGLRRAQTAA
AVASYDASVASYRQTVLSAFQAVEDNLSAQALLDEEMQYQQAALAAAQRAETIALNQYRA
GVVSYLNVLTAQNSRISAENSLWTLKNRQYTASVALIAALGGQW
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcatgtctgcattcaccccgtcccggctggcactggccggcctgatcagcctg
ctgctggcaggctgcgccatcggcccggactatacccggcccaagatggacattccggca
acgtacaaggaagacggccgctggaaaaccgccaccccgcaagatgccgccccgcgtggc
aactggtgggcggtgtatcaggacccgcagctcgatagcctgatggacaccctcaaccgg
caaagccccaccattgcccaggccgaggccaattaccgtaatgcccgcgccttgctggat
caggccgaagccagcctgtggcccaccatcagcagcaccgccagcaaaacccgcggggtg
acaacggcgggcggcagtgtcagcaatcagtacaatctgtccgccagcgccagctgggaa
gtggacctgtggggtacggtgcgccgcgcggtggaggcgggcaatgccaaggaggcggcc
agcgccgcccagctggcgtccatccgcctgagcagccaggcccagctggctactgcctac
ctgcaactggtggcggccgatgtgcagctcaagcaattgcaggacagcgaggccaatctg
ctgcaaaccctgcagctcacccgcaaccagtttgccgtgggcatggtgtcggatgatgcc
gtggcgcaggcggaaagcagctggaaaaccgctcaggccgcccgcgtggacaagcagctg
agccgtgcccagctggagcacgccatcgccgcctcgctgggtgtggccccggccagcttc
acgctgccggtcagcaaaaccctgccccatctgccacaactgccagccggcctgccgtcc
accttgctggagcgccggccggacatcgcggcggcggagcgggcggtggcacaggccaat
gccgaaatcggcattgccaaggccgcgttctttcccacgctgaacctgactgccagcggc
ggttacaagagcagcagctttgccgactgggtaagcctgcccaaccgtatctggagcgtg
gggccgcaactggcactcaccctgtttgacggtggcttgcgccgcgcacagactgccgct
gccgtggccagctacgacgccagcgtggccagctaccgccagaccgtgctgagtgcattt
caggcggtagaggacaatctgtcggcccaggcgctgctggacgaggaaatgcagtaccag
caagcggcactggctgcggcgcagcgggcggaaaccattgcgctcaaccagtatcgcgcc
ggggtggtgagttatctgaatgtgctgaccgcacaaaacagccgcatcagcgccgaaaac
agcctgtggaccctgaaaaaccgccagtacaccgccagcgtggccttgattgctgctctc
ggtggtcagtggtag
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