KEGG   PATHWAY: asca02010
Entry
asca02010                   Pathway                                
Name
ABC transporters - Aliisedimentitalea scapharcae
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
asca02010  ABC transporters
asca02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Aliisedimentitalea scapharcae [GN:asca]
Gene
QEZ52_00665  [KO:K11073]
QEZ52_00670  [KO:K11076] [EC:7.6.2.16]
QEZ52_00675  [KO:K11075]
QEZ52_00680  [KO:K11074]
QEZ52_00995  [KO:K02011]
QEZ52_01000  [KO:K02010] [EC:7.2.2.7]
QEZ52_01005  [KO:K02012]
QEZ52_01020  [KO:K11069]
QEZ52_01025  [KO:K11070]
QEZ52_01030  [KO:K11071]
QEZ52_01035  [KO:K11072] [EC:7.6.2.11]
QEZ52_01450  [KO:K18893]
QEZ52_01585  [KO:K02040]
QEZ52_01675  lptB; LPS export ABC transporter ATP-binding protein [KO:K06861] [EC:7.5.2.5]
QEZ52_01780  [KO:K11070]
QEZ52_01785  [KO:K11071]
QEZ52_01790  [KO:K11072] [EC:7.6.2.11]
QEZ52_01795  [KO:K11069]
QEZ52_01970  thiB; thiamine ABC transporter substrate binding subunit [KO:K02064]
QEZ52_01975  [KO:K02063]
QEZ52_01980  [KO:K02062] [EC:7.6.2.15]
QEZ52_02055  [KO:K11707]
QEZ52_02060  [KO:K11710] [EC:7.2.2.5]
QEZ52_02065  [KO:K11708]
QEZ52_02070  [KO:K11709]
QEZ52_02215  [KO:K09969]
QEZ52_02220  [KO:K09970]
QEZ52_02225  [KO:K09971]
QEZ52_02230  [KO:K09972] [EC:7.4.2.1]
QEZ52_02355  choV; choline ABC transporter ATP-binding protein [KO:K02000] [EC:7.6.2.9]
QEZ52_02360  choW; choline ABC transporter permease subunit [KO:K02001]
QEZ52_02370  choX; choline ABC transporter substrate-binding protein [KO:K02002]
QEZ52_02600  [KO:K02041] [EC:7.3.2.2]
QEZ52_03025  [KO:K02044]
QEZ52_04230  [KO:K13893]
QEZ52_04235  [KO:K13894]
QEZ52_04240  [KO:K13895]
QEZ52_04245  [KO:K13896]
QEZ52_05150  [KO:K09812]
QEZ52_05155  [KO:K09811]
QEZ52_05380  [KO:K23536]
QEZ52_05385  [KO:K23535]
QEZ52_05390  [KO:K23537]
QEZ52_05395  [KO:K07335]
QEZ52_05435  [KO:K09815]
QEZ52_06460  [KO:K11072] [EC:7.6.2.11]
QEZ52_06465  [KO:K11070]
QEZ52_06470  [KO:K11071]
QEZ52_06475  [KO:K11069]
QEZ52_06525  [KO:K17321]
QEZ52_06530  [KO:K17324]
QEZ52_06535  [KO:K17325]
QEZ52_06540  [KO:K17322]
QEZ52_06545  [KO:K17323]
QEZ52_07270  [KO:K12372]
QEZ52_07275  [KO:K12371]
QEZ52_07280  [KO:K12370]
QEZ52_07285  [KO:K12369]
QEZ52_07295  [KO:K12368]
QEZ52_07430  [KO:K10111] [EC:7.5.2.-]
QEZ52_07435  [KO:K10229]
QEZ52_07440  [KO:K10228]
QEZ52_07445  [KO:K10227]
QEZ52_07485  [KO:K02002]
QEZ52_07490  [KO:K02000] [EC:7.6.2.9]
QEZ52_07495  [KO:K02001]
QEZ52_07565  [KO:K01996]
QEZ52_07570  [KO:K01995]
QEZ52_07580  [KO:K01997]
QEZ52_07585  [KO:K01999]
QEZ52_08020  [KO:K01996]
QEZ52_08025  [KO:K01995]
QEZ52_08030  [KO:K01998]
QEZ52_08035  [KO:K01997]
QEZ52_08040  [KO:K01999]
QEZ52_08555  [KO:K10107]
QEZ52_08560  [KO:K09689] [EC:7.6.2.12]
QEZ52_08805  [KO:K05772]
QEZ52_08925  [KO:K01995]
QEZ52_08930  [KO:K01996]
QEZ52_08935  [KO:K01997]
QEZ52_08940  [KO:K01998]
QEZ52_08945  [KO:K01999]
QEZ52_09015  [KO:K11069]
QEZ52_09130  [KO:K24821]
QEZ52_09210  ccmA; heme ABC exporter ATP-binding protein CcmA [KO:K02193] [EC:7.6.2.5]
QEZ52_09215  ccmB; heme exporter protein CcmB [KO:K02194]
QEZ52_09220  [KO:K02195]
QEZ52_09225  ccmD; heme exporter protein CcmD [KO:K02196]
QEZ52_09675  [KO:K17315]
QEZ52_09680  [KO:K17316]
QEZ52_09685  [KO:K17317]
QEZ52_09690  ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC [KO:K10112] [EC:7.5.2.-]
QEZ52_10745  lptG; LPS export ABC transporter permease LptG [KO:K11720]
QEZ52_10750  lptF; LPS export ABC transporter permease LptF [KO:K07091]
QEZ52_10835  [KO:K01998]
QEZ52_10840  [KO:K01997]
QEZ52_10845  [KO:K01996]
QEZ52_10850  [KO:K01995]
QEZ52_10855  [KO:K01999]
QEZ52_10905  [KO:K02040]
QEZ52_10910  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
QEZ52_10925  pstB; phosphate ABC transporter ATP-binding protein PstB [KO:K02036] [EC:7.3.2.1]
QEZ52_11810  [KO:K12541]
QEZ52_11815  [KO:K12536]
QEZ52_12905  [KO:K19341]
QEZ52_12910  [KO:K19340]
QEZ52_13045  [KO:K06857] [EC:7.3.2.6]
QEZ52_13050  [KO:K05773]
QEZ52_13405  [KO:K15583]
QEZ52_13595  [KO:K11085] [EC:7.5.2.6]
QEZ52_13985  [KO:K02012]
QEZ52_14245  [KO:K02066]
QEZ52_14250  [KO:K02065]
QEZ52_14370  [KO:K02010] [EC:7.2.2.7]
QEZ52_15135  mlaD; outer membrane lipid asymmetry maintenance protein MlaD [KO:K02067]
QEZ52_15665  [KO:K23537]
QEZ52_15670  [KO:K23535]
QEZ52_15675  [KO:K23536]
QEZ52_15680  [KO:K07335]
QEZ52_15895  [KO:K09810] [EC:7.6.2.-]
QEZ52_15900  [KO:K09808]
QEZ52_16310  [KO:K11069]
QEZ52_16315  [KO:K11072] [EC:7.6.2.11]
QEZ52_16320  [KO:K11070]
QEZ52_16325  [KO:K11071]
QEZ52_16425  [KO:K09972] [EC:7.4.2.1]
QEZ52_16555  phnE; phosphonate ABC transporter, permease protein PhnE [KO:K02042]
QEZ52_16560  phnE; phosphonate ABC transporter, permease protein PhnE [KO:K02042]
QEZ52_16565  phnD; phosphonate ABC transporter substrate-binding protein [KO:K02044]
QEZ52_16570  phnC; phosphonate ABC transporter ATP-binding protein [KO:K02041] [EC:7.3.2.2]
QEZ52_16630  [KO:K10439]
QEZ52_16635  [KO:K10440]
QEZ52_16640  [KO:K10441] [EC:7.5.2.7]
QEZ52_17205  [KO:K01999]
QEZ52_17215  [KO:K01996]
QEZ52_17220  [KO:K01995]
QEZ52_17225  [KO:K01998]
QEZ52_17230  [KO:K01997]
QEZ52_17360  [KO:K09972] [EC:7.4.2.1]
QEZ52_17430  [KO:K02002]
QEZ52_17435  [KO:K02000] [EC:7.6.2.9]
QEZ52_17440  [KO:K02001]
QEZ52_17490  [KO:K02001]
QEZ52_17495  [KO:K02000] [EC:7.6.2.9]
QEZ52_17500  [KO:K02002]
QEZ52_17530  [KO:K11959]
QEZ52_17540  [KO:K11959]
QEZ52_17545  [KO:K11960]
QEZ52_17550  [KO:K11961]
QEZ52_17555  [KO:K11962]
QEZ52_17865  [KO:K15552]
QEZ52_17870  [KO:K10831] [EC:7.6.2.7]
QEZ52_17875  [KO:K15551]
QEZ52_18100  [KO:K12536]
QEZ52_18110  [KO:K07323]
QEZ52_18440  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
QEZ52_18445  modB; molybdate ABC transporter permease subunit [KO:K02018]
QEZ52_18450  modC; molybdenum ABC transporter ATP-binding protein [KO:K02017] [EC:7.3.2.5]
QEZ52_19135  [KO:K01996]
QEZ52_19140  [KO:K01995]
QEZ52_19145  [KO:K01998]
QEZ52_19150  [KO:K01997]
QEZ52_19155  [KO:K01999]
QEZ52_19165  [KO:K01999]
QEZ52_19265  [KO:K01999]
QEZ52_19270  [KO:K01995]
QEZ52_19275  [KO:K01996]
QEZ52_19280  [KO:K01997]
QEZ52_19285  [KO:K01998]
QEZ52_20105  [KO:K02012]
QEZ52_20115  [KO:K02011]
QEZ52_20125  [KO:K01996]
QEZ52_20130  [KO:K01999]
QEZ52_20135  [KO:K01998]
QEZ52_20145  [KO:K01997]
QEZ52_20150  [KO:K01995]
QEZ52_20640  urtE; urea ABC transporter ATP-binding subunit UrtE [KO:K11963]
QEZ52_20975  [KO:K11072] [EC:7.6.2.11]
QEZ52_20980  [KO:K11070]
QEZ52_20985  [KO:K11071]
QEZ52_20990  [KO:K11069]
QEZ52_21000  [KO:K10440]
QEZ52_21005  [KO:K10441] [EC:7.5.2.7]
QEZ52_21010  [KO:K10439]
QEZ52_21035  [KO:K01998]
QEZ52_21040  [KO:K01997]
QEZ52_21045  [KO:K01996]
QEZ52_21050  [KO:K01995]
QEZ52_21055  [KO:K01999]
QEZ52_21205  [KO:K01996]
QEZ52_21210  [KO:K01995]
QEZ52_21215  [KO:K01998]
QEZ52_21220  [KO:K01997]
QEZ52_21230  [KO:K01999]
QEZ52_21640  [KO:K02424]
QEZ52_21645  [KO:K10009]
QEZ52_21650  [KO:K10009]
QEZ52_21810  urtA; urea ABC transporter substrate-binding protein [KO:K11959]
QEZ52_21815  urtB; urea ABC transporter permease subunit UrtB [KO:K11960]
QEZ52_21820  urtC; urea ABC transporter permease subunit UrtC [KO:K11961]
QEZ52_21825  urtD; urea ABC transporter ATP-binding protein UrtD [KO:K11962]
QEZ52_22340  [KO:K02001]
QEZ52_22345  [KO:K02000] [EC:7.6.2.9]
QEZ52_22350  [KO:K02002]
QEZ52_22470  [KO:K15585]
QEZ52_22480  [KO:K15587] [EC:7.2.2.11]
QEZ52_22975  [KO:K02002]
QEZ52_22995  [KO:K10112] [EC:7.5.2.-]
QEZ52_23000  [KO:K10112] [EC:7.5.2.-]
QEZ52_23025  [KO:K10439]
QEZ52_23030  [KO:K10440]
QEZ52_23035  [KO:K10441] [EC:7.5.2.7]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   

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