Achromobacter seleniivolatilans: RAS12_04215
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Entry
RAS12_04215 CDS
T09953
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
asel
Achromobacter seleniivolatilans
Pathway
asel01501
beta-Lactam resistance
asel01503
Cationic antimicrobial peptide (CAMP) resistance
asel02020
Two-component system
asel03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
asel00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RAS12_04215
09132 Signal transduction
02020 Two-component system
RAS12_04215
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RAS12_04215
01503 Cationic antimicrobial peptide (CAMP) resistance
RAS12_04215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asel02000
]
RAS12_04215
02044 Secretion system [BR:
asel02044
]
RAS12_04215
01504 Antimicrobial resistance genes [BR:
asel01504
]
RAS12_04215
Transporters [BR:
asel02000
]
Other transporters
Pores ion channels [TC:
1
]
RAS12_04215
Secretion system [BR:
asel02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RAS12_04215
RTX toxin transporter
RAS12_04215
Multiple protein transporter
RAS12_04215
RaxAB-RaxC type I secretion system protein
RAS12_04215
Antimicrobial resistance genes [BR:
asel01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
RAS12_04215
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
RAS12_04215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
UBL_AVO1
Motif
Other DBs
NCBI-ProteinID:
WMD21588
LinkDB
All DBs
Position
923248..924888
Genome browser
AA seq
546 aa
AA seq
DB search
MTDHDTLFFRPALARKGMVAMAVLAAMSLAGCAARSGTAPATASAGATETPAAGVQTEGG
TLKMGATGPRETTRFGLAAPSAQMDTVPPEPAPRFDEKTVLPAPASYLAENMPAYNGAQL
PDQTDPMTLDQVYMMALQNDPQLQGAYQELQAVGYGVMSARAGLLPSVSGEVNRSKVRQN
VVDSENAVYQTGRAAWAENGWALTLNQPIFELGAYHKWRQSQDAERKQVASYAYAQQDLM
LRTATAYLSVLAAQDQVELTEAERRTTQKQMELVQARYHSGQETRVGLSEVQARLDIQDA
NTLLAQNDYLDKQQAVQEIIGFGNLKLRPVRKDLPMSMPVPNDPQAWLRTALEQNWSIRA
ASAGVAVAEKEVSVQKAGYYPSVNLRASTGRNETGGSLFGGGSTVADTRVTVNLNVPIFQ
SGYTYGMSHAAASRLSAASSDLSLTRRKVQRQVFSSFQNIVIGIDRMRALNSSVQSFELA
LKLKEEGFTAGLNDIVSVLDATRNLYNAKRQQAEAGYNFVLDGLKLKQGAGTLSAADIAA
ISQQML
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccacgacacgcttttcttccgcccggcgcttgcgcgcaagggcatggtcgcg
atggcggtgcttgccgccatgagcctggccggttgcgccgcccgcagtggcacggcgccg
gccaccgccagcgcgggcgctacggaaacgccggccgccggggtgcagaccgaaggcggc
acgctcaaaatgggcgcaaccggaccgcgcgagaccactcgtttcggcctggccgcgccc
agcgcgcagatggacacagtgccgcccgaacccgcgccgcgctttgacgaaaaaaccgtt
ttgcccgcgcctgcgtcctatctggccgaaaacatgcccgcctacaacggcgcccagctg
ccggatcaaactgatccgatgacgctggatcaggtctacatgatggcgttgcaaaacgat
ccgcaactgcaaggcgcttatcaagagttgcaagccgtgggttatggcgtgatgtcggcg
cgcgccggcctgttgcccagcgtcagcggtgaggtcaaccgcagcaaggtgcgccagaac
gtggtcgacagcgaaaacgcggtctatcagacaggtcgcgccgcttgggcggaaaacggt
tgggcgctgacgctgaatcagcccatctttgaactgggcgcgtatcacaagtggcgccag
tcgcaagacgccgaacgcaagcaagtggccagctatgcctatgcgcagcaggatttgatg
ctgcgcaccgctaccgcctatctcagcgtgctggcggcgcaagatcaggttgagttgacc
gaagccgaacgccgcaccacgcaaaagcagatggagctggtgcaggcgcgttatcacagc
ggtcaggaaacgcgggttgggctgagcgaagttcaggcgcgcctggacatccaggatgcc
aatacgctgctggcccagaacgactatctggacaagcagcaggcggttcaggaaatcatc
ggctttggcaatctgaagttgcgcccggtccgcaaggatctgcccatgtccatgccggtg
ccgaatgatccgcaagcctggctgcgaacggcgctggagcaaaactggtcgatacgcgcc
gcgtccgccggcgtggccgtggccgaaaaagaagtgtcggtgcagaaggcggggtactac
cccagcgtgaatctgcgcgcgtccaccggacgcaacgaaacgggcggcagcttgtttggg
ggcggcagcacggtagccgacacccgcgtgacggtgaacctgaacgttcccatctttcaa
agtggctacacctacggcatgagccacgctgccgccagccgcctgagcgcggcgtcgtcc
gacctgagcctgacgcgccgcaaggtgcagcgtcaggtgttctcgtcgtttcagaacatc
gtgatcggcatagaccggatgcgtgcgttgaacagttcggtgcagtcttttgaactggcg
ttaaagctgaaggaagaaggctttaccgctggcctgaatgacattgtcagcgtgctggac
gccacgcggaatctgtacaacgcgaagcggcagcaagccgaggctggctacaacttcgtg
ctggacgggctaaagctcaagcagggcgcaggaaccttgagcgccgccgacatcgcggcg
atcagtcagcagatgctgtaa
DBGET
integrated database retrieval system
