Atlantibacter subterraneus: NLZ15_06330
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Entry
NLZ15_06330 CDS
T08300
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
asub
Atlantibacter subterraneus
Pathway
asub00680
Methane metabolism
asub00720
Other carbon fixation pathways
asub01100
Metabolic pathways
asub01120
Microbial metabolism in diverse environments
asub01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
NLZ15_06330 (fdhF)
00680 Methane metabolism
NLZ15_06330 (fdhF)
Enzymes [BR:
asub01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
NLZ15_06330 (fdhF)
1.17.98.5 hydrogen-dependent carbon dioxide reductase
NLZ15_06330 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
UTJ48645
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Position
complement(1352269..1354416)
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AA seq
715 aa
AA seq
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MKKVVTVCPYCASGCKINLVVDNGKVVKAEPAQGKTNQGDLCLKGYYGWDFINDTQILTP
RLKSPMIRRQRGGKLEAVSWDEALNYVADKLSTIKAKYGPDAIMTTGSSRGTGNETNYIM
QKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNSIVGIEDADLVFVFGYNPADS
HPIVANRVIRAKQKGAKVIVCDPRKIETARIADMHLALKNGSNIALLNAMGHVIIEEDLY
DHAFVAARTEGFEEYRKIVEGYTPESVEEITGVKASEIRQAARMYAKSERATILWGMGVT
QFYQGVETVRSLTSLALLTGNLGKPSVGVNPVRGQNNVQGACDMGALPDTYPGYQYVKFP
EHREKFAKAWGVAELPAHTGYRISELPHRVEHGEVRAAYIMGEDPLQTDAELSAVRKAFE
GLELVIVQDIFMTKTAAQADVILPSTSWGEHEGVYTAADRGFQRFFKAVEPKWDLKTDWQ
IISEIATRMGYAMHYNNTKEIWDELRGLCPDFYGATYEKMGELGYIQWPCRDVSEADQGT
DYLFEDKFSTPNGLGQLFTCDWAPPLDRVNEEYPMVLSTVREVGHYSCRSMTGNCAALAA
LADEPGYAQINTADAARLGIQDEALVWVNSRKGKVITRAQVSDRPNKGAVYMTYQWWIGA
CNELVTENLSPITKTPEYKYCAVRVEPIADQNAAEQYVINEYNKLKRHLRETAMG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtcgtcacggtttgcccatattgcgcgtcggggtgcaagatcaacctcgtc
gtcgataatggcaaagtcgttaaggcggaaccggcgcagggtaagaccaatcagggggat
ttatgcctgaaggggtattacgggtgggattttatcaatgacacccagatcctgacgcca
cgccttaaatcgcctatgatccgtcgccaacgcggcgggaagctggaagccgtttcctgg
gatgaggcgctgaattatgtcgccgataagctcagcaccatcaaagccaaatatggtccg
gacgccattatgaccaccggttcgtcccggggtaccggcaacgaaaccaactacatcatg
caaaaattcgcgcgcgccgttattggaaccaataacgtcgattgctgcgcacgtgtctga
cacggcccatcggttgcaggtctgcaccagtcggtcggtaatggcgcgatgagtaactcc
atcgtcggtatcgaagatgctgatttagtgtttgtgtttggctataaccctgctgattct
cacccgatcgtcgcaaaccgcgtgatcagggcgaagcagaaaggggcgaaagtgatcgtc
tgcgatccgcgtaaaatcgaaaccgcgcgtattgccgatatgcacctggcgttaaaaaac
ggctccaatatcgcgctgttgaacgccatgggccatgtgatcatcgaagaagatctgtat
gaccacgcgtttgtcgcggcgcgtaccgaaggcttcgaggagtatcgcaaaatcgttgaa
ggctatacgccggagtccgtggaagagatcaccggcgtgaaggccagtgagatccgccag
gccgcgcggatgtatgccaaatccgaacgggccaccatcctgtggggcatgggcgtgacc
cagttctatcagggcgtggaaacggtgcgttcgttgaccagcctggcgctgctgaccggc
aacctcggcaagccgagcgtgggcgttaacccggtgcgtgggcaaaacaacgttcagggc
gcatgcgatatgggcgcgctgccggatacctatccgggttaccagtacgtcaagttcccg
gagcaccgcgagaaattcgctaaagcctggggcgtggccgaactgcccgcgcataccggt
tatcgcatcagcgagctgccgcaccgcgttgagcatggtgaagtgcgcgcggcgtacatc
atgggcgaagatccgctgcaaaccgatgccgagctgtcagcggtgcgtaaagcctttgaa
gggctggagctggtgatcgttcaggatatcttcatgaccaaaaccgccgcgcaagcggat
gtgattttgccgtccacctcgtggggggaacatgaaggggtgtataccgccgccgaccgc
ggattccagcgcttctttaaagcagtggaaccgaagtgggacctgaagaccgactggcag
atcatcagtgaaatcgccacccggatgggctatgcgatgcactacaacaacaccaaagag
atttgggatgagctgcgcggattgtgcccggacttctacggtgcaacctacgagaaaatg
ggcgagctgggttatatccagtggccgtgccgcgatgtctccgaggccgatcagggaacg
gattatctgttcgaggataaattctccacgccgaacggtctggggcaattgttcacctgc
gactgggccccgccgctcgatcgcgtgaatgaagagtacccgatggtgctgtcgacggtg
cgtgaagtcggccactactcgtgccgttccatgaccggtaactgcgccgcgctggctgcg
ctggcggatgaaccgggctacgcgcagatcaacaccgccgatgccgctcgcctgggcatc
caggatgaagcgctggtgtgggtgaattcgcgcaaaggcaaagtcattacccgcgctcag
gtgagcgatcgcccgaacaaaggcgcggtatatatgacttaccagtggtggattggtgcc
tgtaatgaactggtgacggaaaacctcagcccgattaccaaaacgccggagtacaagtac
tgtgcggtgcgcgttgagccgattgccgatcagaatgcggcagagcagtacgtgatcaat
gagtacaacaagctgaaacgccatttacgggaaaccgcaatgggctga
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