Apodemus sylvaticus (European woodmouse): 127690199
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Entry
127690199 CDS
T10613
Name
(RefSeq) interstitial collagenase A
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
asyl Apodemus sylvaticus (European woodmouse)
Pathway
asyl03320
PPAR signaling pathway
asyl04657
IL-17 signaling pathway
asyl04926
Relaxin signaling pathway
asyl05171
Coronavirus disease - COVID-19
asyl05200
Pathways in cancer
asyl05219
Bladder cancer
asyl05323
Rheumatoid arthritis
asyl05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
asyl00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
127690199
09152 Endocrine system
03320 PPAR signaling pathway
127690199
04926 Relaxin signaling pathway
127690199
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127690199
09162 Cancer: specific types
05219 Bladder cancer
127690199
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
127690199
09163 Immune disease
05323 Rheumatoid arthritis
127690199
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
127690199
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asyl01002
]
127690199
Enzymes [BR:
asyl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
127690199
Peptidases and inhibitors [BR:
asyl01002
]
Metallo peptidases
Family M10
127690199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Metallopep
Reprolysin_5
DUF4953
Reprolysin_3
Reprolysin_4
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
127690199
NCBI-ProteinID:
XP_052045705
LinkDB
All DBs
Position
7:complement(128179918..128192914)
Genome browser
AA seq
464 aa
AA seq
DB search
MHSLLLLLLLWGTSSYSFPVFQDGVRQNVETVWKYLENYYNLGKDMQAKNVNSKEVMAEK
LRQMQKLFGLKVTGSSDPETLSAMRKPRCGVPDVAPYAITHNNPRWSKTHLTYSILNYTP
YLPRAVVEDAIERAFRVWSDVTPLTFERVFEEEGDIVFSFHRGDHDDNNPFDGPNYKLAH
TFPPGPRLGGDVHYDLDERWTDNSDNFNLFYVTAHELGHSLGLTHSSDIGALMFPSYTWY
TEDFVLNQDDINRIQALYGPSPNPIQPTGATTPHPCDGDITFDAITTFRGEVMFFKGRFY
IRVNRFMPEAELNLIGILWPNLPGKLDAAYEVSMIDQVRYFKGNKVWAVREQSVLRGFPT
DIHSFFGFPSDVTHIDAAVCEEEIGKTYFFVDHMYWRYDENTRSMDPGYPRLIAEDFPGI
EDKVDDVFQKDENFYFFHQSVQHRFNLRIRRVDESRDSRTWFNC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtcttcttttgttgttgcttctctggggtaccagctcatacagcttccccgtg
tttcaggatggagtccggcaaaatgtggagacagtctggaaatacctggaaaactactac
aacttgggcaaagacatgcaagctaaaaatgtgaatagcaaggaggtgatggctgaaaag
ctgaggcaaatgcagaaattatttgggctgaaagtgactggaagttcagatcctgaaacc
ctgagtgctatgaggaagcccaggtgtggggtgcctgatgtggccccatatgccatcact
cacaacaatcctcgttggagcaaaactcatctgacttacagcattttaaactacactcca
tatttgccaagagcagttgtggaagatgccatcgagagagcctttcgagtctggagtgat
gtgacaccactaacattcgaaagggtctttgaggaggaaggagatatcgtgttctctttc
cacagaggagaccatgatgacaataacccatttgatggaccaaactataaacttgctcac
accttcccgccaggcccacgtttgggaggcgatgttcattacgatcttgatgagaggtgg
actgacaacagtgacaatttcaacctgttttatgtcacggctcatgaactcggccactcc
cttggactcactcattctagtgacataggagcactgatgttccccagctacacatggtac
actgaagactttgtgctaaaccaggatgatattaatcgcatccaggctttatatgggcct
tccccaaatcccatccagccaacaggtgcaaccactccacatccatgtgatggtgatata
acctttgatgcaataactacatttaggggagaggtgatgttcttcaaaggcaggttctac
attcgggtaaatagattcatgccagaagctgagctcaatttgataggtattctctggcca
aatctgccaggtaaacttgacgctgcctatgaagttagcatgatagatcaagtccgctat
ttcaaaggcaataaagtctgggcagttcgagaacagagcgtcctgagaggattccccaca
gacatccacagcttctttggcttccctagcgacgtgacacacattgatgctgccgtttgt
gaggaagagattggaaaaacatacttttttgttgaccacatgtactggaggtatgatgaa
aacacacggtccatggacccaggttatcccagattaatagcagaagacttccctggaatt
gaggataaagtagatgatgttttccaaaaagacgaaaatttttatttctttcaccaatca
gttcaacacagatttaacctccgaataagaagagttgatgaatcccgtgattctagaacc
tggttcaactgctaa
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