Burkholderia ambifaria AMMD: Bamb_0040
Help
Entry
Bamb_0040 CDS
T00398
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam01501
beta-Lactam resistance
bam02024
Quorum sensing
Module
bam_M00643
Multidrug resistance, efflux pump MexXY-OprM
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Bamb_0040
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Bamb_0040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bam02000
]
Bamb_0040
01504 Antimicrobial resistance genes [BR:
bam01504
]
Bamb_0040
Transporters [BR:
bam02000
]
Other transporters
Pores ion channels [TC:
1
]
Bamb_0040
Antimicrobial resistance genes [BR:
bam01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Bamb_0040
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Bamb_0040
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Bamb_0040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ABI85601
UniProt:
Q0BJS2
LinkDB
All DBs
Position
1:49812..51374
Genome browser
AA seq
520 aa
AA seq
DB search
MPYAPLPRAFRPLSAAVAVATAVLLAGCAVGPDYHRPDTSIPAAFKEAPAGWKVAQPADR
ADRGPWWSVYNDPQLDALIGKLNASNQTIAQSAAAYRQARALVAEARAAYFPTVGLTASG
SRARSGRTPTSSGASGFGSSSSISNSYSVGLDASWEPDLWGKVSRSVSAQRAGEAAAAAD
LANARLSQQALLAQTYFQLRTSDALQKLLDDTVKSYGDSLRLTQNQYAQGVAARADVIQA
QTQLQSAQAAAIDNGVARAQYEHAIATLIGEPASTFSLPPNPLTAQPPITPVDVPSALLE
RRPDIAAAERRAASANEQIGVAIAAFFPTLTLSATGGFQSSVWSQLFTLPARFWTVGPQL
AATLFDAGLRAAQTDAARATYDQDVAAYRLAVLTAFQDVEDNLASQRILAQEVDVQRQAV
DSAEQALAIVTNQYKAGTVAYLNVLSAQTTAFTAQQKLATIAGQRMVSSVGLVKALGGGW
DASDMARETGDVAAPVPVPASGAAAPAATSPSAAAPLAQK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgcccccctcccgcgcgcctttcgcccgctgagcgccgccgtcgccgttgcg
acggccgtgctgctcgccggctgcgccgtcgggcccgactatcaccggcccgacacgtcg
atccccgccgccttcaaggaagcgccggccggctggaaggtcgcgcagccggccgaccgg
gccgaccgcggcccgtggtggagcgtctacaacgatccgcagctcgacgcgctgatcggc
aagctcaacgcatcgaaccagaccatcgcgcaatcggccgccgcgtaccggcaggcccgc
gcgctcgtcgccgaagcgcgcgccgcgtatttcccgaccgtcgggctgaccgcgtcgggc
tcgcgcgcacgctcggggcgcacgcccacgtcgtcgggcgcgtcgggcttcggcagcagt
tcgtcgatcagcaacagctacagcgtcggtctcgatgcgagctgggagcccgacctgtgg
ggcaaggtgagccgcagcgtcagcgcgcagcgcgccggcgaagcggccgccgcggccgat
ctcgcgaatgcgcggctgtcgcagcaagcgctgctcgcgcagacctacttccagctgcgc
acgtccgatgcgctgcagaaactgctcgacgacaccgtgaagtcgtacggcgactcgctg
aggctcacgcagaatcagtacgcgcagggcgtcgccgcgcgcgcggacgtgatccaggcg
cagacgcagctgcagagcgcgcaggccgcggcgatcgacaacggcgtcgcgcgcgcgcag
tacgagcatgcgatcgcgacgctgatcggcgagccggcatcgacgttctcgctgccgccg
aacccgctcaccgcgcaaccgccgatcacgccggtcgacgtgccgtccgcgctgctcgag
cggcggccggacatcgcggcggccgagcgccgcgcagcttccgcgaacgagcagatcggc
gtggcgatcgccgcgttcttcccgacgctcacgctgtccgccaccggcggcttccagagc
tcggtgtggtcgcaattgttcaccttgcccgcgcggttctggacggtcggcccgcaactc
gcggccacgctgttcgacgccggcctgcgcgccgcgcagaccgatgccgcccgcgcaacc
tacgaccaggacgtcgccgcatatcgtctcgcggtgctcaccgcgttccaggacgtcgag
gacaacctcgcgtcgcagcgcatcctcgcgcaggaagtcgacgtgcagcggcaggccgtc
gacagcgccgagcaagcgctcgcgatcgtcacgaaccagtacaaggcgggcacggtcgcc
tacctgaacgtgctgagcgcgcagaccaccgcgtttaccgcgcagcagaagctcgcgacg
atcgccggccagcggatggtgtcgtccgtcgggctcgtgaaggcgctgggcggcgggtgg
gatgcgtcggacatggcgcgcgagacgggcgacgtggcggcgccggtgccggtgccggcg
tccggtgcggcggcgccggccgcgacctcaccgtcagccgccgcgccgctcgcgcagaag
taa
DBGET
integrated database retrieval system
