Paraburkholderia caribensis: K788_0001902
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Entry
K788_0001902 CDS
T04141
Name
(GenBank) RND efflux system, outer membrane lipoprotein CmeC
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bcai
Paraburkholderia caribensis
Pathway
bcai01501
beta-Lactam resistance
bcai02024
Quorum sensing
Module
bcai_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
bcai00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K788_0001902
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K788_0001902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcai02000
]
K788_0001902
01504 Antimicrobial resistance genes [BR:
bcai01504
]
K788_0001902
Transporters [BR:
bcai02000
]
Other transporters
Pores ion channels [TC:
1
]
K788_0001902
Antimicrobial resistance genes [BR:
bcai01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K788_0001902
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
K788_0001902
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
K788_0001902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ALL71282
UniProt:
A0A0P0RQG5
LinkDB
All DBs
Position
unnamed:complement(1985508..1987028)
Genome browser
AA seq
506 aa
AA seq
DB search
MNRTLLTTLAAALFATGCTLAPTYERPAAPVAATFPQGGVYDNQPGKGTATRTANDHAAT
DIGWREFFVDPRLQRLIELALQNNRDLRVSALKVEEARAQYRIQRADLMPSLSVDGTGTR
SRTPKDLSYVGKATVGADYQVAASASWELDFFGKVRSLTEQSLQTYFSTAQARKAEEILL
VSQVADQYLTLVAYDEMLASTKNTYDTARRSYELTKLQYDTGTGSELDLREAAGTMQQAQ
ASYESQQRSRAQAENALVLLVGAPLPADLPQGLPLASQQLLADIPAGLPSDLLTRRPDIM
EAEATLIGSNANIGAARAAFFPSISLTGDFGTASASLGSLFKPGQLAWSFGPTISVPIFK
GGENRANLDLAKLEKNVAVAQYEKAIQTAFREVSDGLAARGTYDRQIKALQENVESQQRR
YDLSDVRYRNGVDSYLNVLTAQNDLYSAQQSLITASLNRLTNLVDLYQYLGGGWIERTGD
TPRSADAPYAQQASPTPPPTRVAAQP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaacactactgacgacgctcgccgccgcgctcttcgcgacgggctgcacgctc
gcgccgacctatgagcgtccggccgcgcccgtcgcggcgacctttccgcaaggcggcgtc
tacgacaaccagccgggtaaaggcacggcgacccgcacggcaaacgatcacgccgcaacc
gacatcggctggcgcgagttcttcgtcgatccgcgcctgcaacggctgatcgagctcgcg
ctgcagaacaaccgcgacttgcgcgtctcggcgctcaaggtcgaggaagcacgcgcgcaa
taccgcatccaacgcgccgatctgatgccgtcgctttccgtcgatggcacgggcacgcgc
agccgcacgccgaaggatttgtcgtacgtcggcaaggcgacggtgggcgccgactatcag
gtagcggcgagcgcttcgtgggaactcgacttcttcggcaaggtgcgcagcctcaccgag
cagtcgttgcagacgtacttctcgacagcgcaggcgcgcaaggcggaagaaatcctgctg
gtgtcgcaggtcgccgatcaatatctgacgctcgtcgcctatgacgaaatgctggcaagc
acgaagaacacctacgacacggcgcgccgctcgtacgaactgacgaagctccagtacgac
acgggcacgggctccgaactcgatctgcgcgaagcggcgggcacgatgcagcaggcgcag
gcgagctacgaaagccagcagcgctcgcgcgcgcaggcggagaacgcgctcgtgctgctg
gtcggcgcgccgctgcctgccgacctgccgcaaggcttgccgcttgcgagccagcaactg
ctcgcggatattccggcgggtctgccgtccgatctgctgacgcgccgtcccgacatcatg
gaagccgaggcgacgctgatcggctcgaatgcgaatatcggcgcggcgcgcgcggcgttc
ttcccgagcatctcgctgacgggcgacttcggcacggcgagcgcgagcctcggctcgttg
ttcaagcctgggcagctggcgtggagcttcgggccgacgatttcggtgccgatcttcaag
ggcggcgagaaccgcgcgaacctcgatctcgcgaagctcgaaaagaacgtcgccgtcgcg
cagtacgaaaaggcgatccagacggcgttccgcgaagtctcagacgggctggcggcgcgc
ggcacctacgaccggcagatcaaggcgttgcaggagaacgtcgagtcgcagcagcgccgc
tatgacctgtccgatgtgcggtatcgcaatggcgtggacagttatctgaacgtgctgacg
gcgcagaacgacctgtactcggcgcagcagtcgctgattacggcgtcgctgaaccggctc
acgaatctcgtcgatctctatcagtatcttggcggcgggtggatcgagcgcacgggcgac
acgccccgttccgccgatgcaccctacgcgcagcaagcctcaccgaccccaccgcccacg
cgcgtcgccgcgcagccgtaa
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