Burkholderia cepacia DDS 7H-2: DM42_1729
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Entry
DM42_1729 CDS
T03302
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced01501
beta-Lactam resistance
bced02024
Quorum sensing
Module
bced_M00643
Multidrug resistance, efflux pump MexXY-OprM
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM42_1729
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DM42_1729
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bced02000
]
DM42_1729
01504 Antimicrobial resistance genes [BR:
bced01504
]
DM42_1729
Transporters [BR:
bced02000
]
Other transporters
Pores ion channels [TC:
1
]
DM42_1729
Antimicrobial resistance genes [BR:
bced01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DM42_1729
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DM42_1729
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DM42_1729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIO49666
LinkDB
All DBs
Position
1:complement(1886107..1887678)
Genome browser
AA seq
523 aa
AA seq
DB search
MPYAPLPRAVRPLSAAVAIATAVLLAGCAVGPDYHRPDTSIPAAFKEAPAGWKVAQPADR
ADRGPWWTVYNDPQLDALIGKLNASNQTIAQSAAAYRQARALVTEARAAYFPTVGLTASG
SRARTPRTSLSSGSSSNFGSGSTGSINNSYSVGLDASWEPDLWGKVSRTVSAQRAGEAAA
AADLANARLSQQALLAQTYFQLRTSDALQKLLDDTVQSYQRSLQLTQNQYAQGVAARADV
IQAQTQLQSAQAAQIDNGVARAQYEHAIATLIGEPASTFSLPPNPLAAEPPITPVDVPSA
ILERRPDIAAAERRAAAANEQIGVAIAAFFPTLTLSATGGFQSSVWSQLFTLPARFWTVG
PQLAATLFDAGLRAAQTDAARATYDQDVAAYRLAVLTAFQDVEDNLASQRILAQEIDVQR
QAVDSAEHALAIVTNQYKAGTVAYLNVLTAQTTAFTAQQKLATIAGQRMASSVGLVKALG
GGWNVSEMARENGDMAAPAPLPASGATAPAATAPSPVAPLAQK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgcccccctcccgcgcgccgttcgcccgctgagcgccgccgtcgccatcgcg
acggccgtgctgctcgccggctgcgccgtcgggcccgactatcaccggcccgacacgtcg
atccccgccgccttcaaggaagcgccggccggctggaaagtcgcgcagcccgccgatcgc
gccgaccgcggcccgtggtggacggtctacaacgatccgcagctcgatgcgctgatcggc
aagctcaacgcgtcgaaccagaccatcgcgcaatcggcggccgcctaccggcaggcgcgc
gcgctcgtcaccgaggcgcgcgccgcgtatttcccgaccgtcgggctgaccgcatcgggc
tcgcgcgcgcggacgccgcgcacgtcgctgtcgtccggttcgtcgtcgaatttcggcagc
gggtcgaccgggtcgatcaacaacagctacagcgtcggcctcgatgccagctgggaaccg
gacctgtggggcaaggtgagccgcaccgtcagcgcgcagcgcgccggcgaagcggccgcc
gcggccgatctcgcgaacgcgcggctgtcgcagcaggcgctgctcgcgcagacctacttc
cagttgcgcacgtccgatgcgctgcagaagctgctcgacgacaccgtgcagtcgtaccaa
cggtcgctgcagctcacgcagaaccagtacgcgcagggcgtcgccgcgcgcgcggacgtg
atccaggcgcagacgcagctgcagagcgcgcaggccgcgcagatcgacaacggcgtcgcc
cgcgcgcaatacgagcatgcgatcgcgacgctgatcggcgagccggcatcgaccttctcc
ctgccgccgaacccgctcgcggccgagccgccgatcacgccggtcgacgtgccgtccgcg
atcctcgagcgccggcccgacatcgcggcggccgagcgccgcgccgcggccgcgaacgag
cagatcggcgtcgcgatcgccgcgttcttcccgacgctcacgctgtcggccaccggcggc
ttccagagctcggtgtggtcgcagctgttcacgctgccggcacgcttctggacggtcggc
ccgcagctcgcggccacgctgttcgacgcgggtctgcgcgccgcgcagaccgatgcggcg
cgcgcgacctacgaccaggacgtcgccgcctatcggctcgcggtgctcaccgcgttccag
gacgtcgaggacaacctcgcgtcgcagcgcatcctcgcgcaggaaatcgacgtgcagcgg
caggccgtcgacagcgccgagcacgcgctcgcgatcgtcacgaaccagtacaaggccggc
acggtcgcgtacctgaacgtgctgaccgcgcagaccaccgcgttcaccgcgcagcagaag
ctcgcgacgatcgccgggcagcggatggcgtcgtcggtcgggctcgtgaaggcgctcggc
ggcggctggaacgtatcggagatggcgcgcgagaacggcgacatggcggcgccggcgcct
ttgccggcgtccggtgcgaccgcgcccgcggccaccgcaccgtcgcccgtcgcgccgctc
gcgcagaagtag
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