Burkholderia cepacia DDS 7H-2: DM42_3026
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Entry
DM42_3026 CDS
T03302
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bced
Burkholderia cepacia DDS 7H-2
Pathway
bced01501
beta-Lactam resistance
bced02024
Quorum sensing
Module
bced_M00643
Multidrug resistance, efflux pump MexXY-OprM
Brite
KEGG Orthology (KO) [BR:
bced00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM42_3026
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DM42_3026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bced02000
]
DM42_3026
01504 Antimicrobial resistance genes [BR:
bced01504
]
DM42_3026
Transporters [BR:
bced02000
]
Other transporters
Pores ion channels [TC:
1
]
DM42_3026
Antimicrobial resistance genes [BR:
bced01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DM42_3026
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DM42_3026
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DM42_3026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIO49489
LinkDB
All DBs
Position
1:complement(3267974..3269389)
Genome browser
AA seq
471 aa
AA seq
DB search
MADRLLAALLGSAALLAGCSLAPTYRAPDVPVPAAFRETGPWIDAAPADRLPRDGWWRVY
GDATLDRLEPLVARANPDLAAAVARHDEAAALFDEAHAALLPTVGIGAETDRDRQSARRP
LRGSGQPDVYESNTLAAGIGYDVDLWGKVRNTVAAGRDDAQAAADDLASVQLSLQAGVAS
TYFDLAGLDREADTLTQTIDTYRRAWQLTVSRHRGGLASGLDVARAQTQLALAQARASDI
AARRALDEHAIAALVGASASTFTLPSAAALPGVPPIPTGLASTLLERRPDVAAAERRVAA
ANARIGVARAAFFPDLSLGLDAGFQSDTFSPWLAAPNEIWSVGPRLAMTLFDGGLRAAGV
RHARAQFAEQGARYRSVVLQAFREVEDDLALLHRLGDEADQDDAALVAARQSLMLAMSRY
RDGAVSYLDVVTAQTTELDTQIAALDVDTRRLQASVGLVRALGGGWRGARS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccgtcttctcgccgcgttgctgggcagcgccgcactgctggccggctgttcg
ctggcgccgacgtatcgcgcgcccgacgttccggtgccggccgcatttcgtgaaacgggc
ccgtggatcgacgccgcgccggccgaccgcctgccgcgcgacggctggtggcgcgtgtac
ggcgacgcgacgctcgaccggctcgaaccgctcgtcgcgcgcgcgaatcccgatctcgcc
gccgccgtcgcgcggcacgacgaagccgccgcgctgttcgacgaagcccatgcggcgctg
ctgccgaccgtgggcatcggggccgagaccgaccgcgaccggcagtcggcgcgccggccg
ttgcgcggcagcggccagcctgacgtctacgaatcgaacacgctcgcagccggcatcggc
tacgacgtcgatctgtggggcaaggtccgcaatacggtcgcggccggccgcgacgacgcg
caggcggccgccgacgatctcgcgtcggtccagctgagcctgcaggccggcgtcgcgagt
acctacttcgatctcgcgggtctcgaccgcgaagccgacacgctcacgcaaaccatcgac
acgtaccgccgcgcgtggcaactgaccgtcagccgccatcgcggcggcctcgcatcgggg
ctcgacgtggcgcgcgcgcagacgcaactcgcgctcgcccaggcccgcgcgtccgacatc
gccgcccgccgcgcgctcgacgagcacgcgatcgcggcgctcgtcggcgcgtcggcatcg
acgttcacgctgccgtccgccgcggcactgcccggcgtgccaccgatcccgacgggactt
gcctcgacgctgctcgaacgccggccggacgtcgccgccgccgagcgccgcgtcgcggcc
gcgaacgcgcgaatcggcgtcgcgcgcgcagcttttttcccggacctgtcgctcggcctc
gacgcgggcttccagagcgatacgttctcgccgtggctcgccgcgccgaacgagatctgg
tcggtcgggccgcgtctcgcgatgacgctgttcgacggcggcctgcgcgcggccggcgtg
cgccacgcccgtgcgcagttcgccgaacagggtgcgcgctaccggtccgtcgtgctgcag
gcgttccgcgaagtcgaggacgatctcgcgctgctgcaccgcctcggcgacgaagcggac
caggacgacgcggcgctcgtcgcggcgcggcagtcgctgatgctcgcgatgtcgcgctat
cgcgacggcgcggtcagctatctcgacgtggtcaccgcgcagacgaccgaactcgatacg
cagatcgcggcgctcgatgtcgacacgcggcgcctgcaggcatccgtcgggctcgtacgc
gcactcggcggcggctggcgcggcgcgcgttcatga
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