Burkholderia cenocepacia DDS 22E-1: DM39_1655
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Entry
DM39_1655 CDS
T03308
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen01501
beta-Lactam resistance
bcen02024
Quorum sensing
Module
bcen_M00643
Multidrug resistance, efflux pump MexXY-OprM
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM39_1655
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DM39_1655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcen02000
]
DM39_1655
01504 Antimicrobial resistance genes [BR:
bcen01504
]
DM39_1655
Transporters [BR:
bcen02000
]
Other transporters
Pores ion channels [TC:
1
]
DM39_1655
Antimicrobial resistance genes [BR:
bcen01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DM39_1655
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DM39_1655
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DM39_1655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DIMCO_N
CtIP_N
Motif
Other DBs
NCBI-ProteinID:
AIO31323
UniProt:
A0AAN0VKZ9
LinkDB
All DBs
Position
1:complement(1798917..1800449)
Genome browser
AA seq
510 aa
AA seq
DB search
MRFLRPLPFTRRVVVLGVAAALAACSTLPPYSPPAVAVPAHYAGIPASGVPAAGIPAAGA
SAAQSGWDVAAPADAAPRGPWWTAFGDPDLNALEARVDVSNQTVKKAVADLQQARAMVDY
QHAGFLPTITAGVAQTRTRVSQNKLGSSLAGQSTSDYQTGVAASWEPDLFGRVRDAVSGA
QANADASAADLQSVKLSVTADLATDYFALRSLDTQKRLLDDSVRAYADALQLLQRQLAAG
AIDASAVAQAATQLEATRTQDTDIDVSRAQLQHAIATLVGENASTFALPPRVQPLVPPTI
PAGLPSQLLERRPDIAAAERRVAAANAQIGAARAAFFPDLILSASAGLESGFFAPWLTAP
SLFWSLGPQLVGTLFDGGRRSASLRGAHAQYDGAVADYRQTVLVAFQQVEDQLSALDALA
SEALSQQRATDAADLSLRLTTNRFNAGAVSYLDVVTAQTIALTNQRQADQIAARRMEAAV
GLLKALGGGWQAGAAPRARQPGPVRAKPGS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttccttcgcccgcttccattcacccgccgcgtcgtcgtgctcggcgtcgccgcc
gcactggccgcgtgctcgacgctgccgccctattccccgcccgcggtcgcggtgcctgcg
cattatgcgggcataccggcgtcgggcgtaccggctgcgggcataccggctgcgggtgca
tcggccgcgcaatccggctgggacgtcgccgcaccggccgatgccgcaccgcgcggccca
tggtggaccgccttcggcgatcccgatctgaacgcgctcgaagcacgcgtcgacgtgtcg
aaccagaccgtgaagaaagccgttgcggatcttcagcaggcgcgcgcgatggtcgactac
cagcatgcgggtttcctgccgaccatcacggccggcgtcgcgcagacccgcacgcgtgta
tcgcagaacaagctcggctcctcgctcgcgggccagagcacgtccgattaccagaccggc
gtggccgcaagctgggagcccgacctgttcggccgcgtgcgcgatgcggtgagcggcgcg
caggcgaacgccgatgcaagcgcggccgatctgcaatcggtgaagctgtcggtcacggcc
gatctcgcgaccgactacttcgcgctgcgctcgctcgatacgcagaagcggctgctcgac
gactcggtccgcgcgtatgcggacgcgctgcagctgctgcagcggcagctcgcggcgggc
gcgatcgatgcgtccgcggtggcgcaggccgcgacgcagctcgaagcgacccgcacccag
gacaccgatatcgacgtgtcgcgcgcgcaactccagcatgcgatcgcgacgctggtcggc
gagaatgcgtcgacgtttgcgttgccgccgcgcgtgcagccgctggtgccgccgacgatt
ccggccggcctgccgtcgcagctgctcgagcggcgccccgacatcgcggcggccgagcgg
cgcgtcgcggccgcgaatgcgcagatcggcgcggcgcgcgcggcgtttttccccgacctg
atcctgtcggcgagcgcggggctcgagagcggcttcttcgcgccctggctgaccgcaccg
agcctgttctggtcgctcggcccgcaactcgtcggcacgctgttcgacggcggccgtcgc
agcgcatcgctgcgcggcgcacatgcgcaatacgacggcgcggtcgccgactaccggcag
accgtgctggtcgcgttccagcaggtggaggatcaactgtccgcgctcgacgcgctcgcg
tcggaggcgctcagccagcagcgtgcgaccgatgcggccgacctgtcgctgcgactgacg
acgaaccgcttcaacgcgggcgccgtgagctatctcgatgtggtgaccgcgcagacgatc
gcgctgacgaaccagcgccaggccgaccagatcgccgcgcgccggatggaggccgcggtc
gggctgctgaaggcgctgggcggtggctggcaggcgggcgccgcgccccgagcgcggcag
ccagggccggttcgcgctaagccgggttcctga
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