Burkholderia cenocepacia DDS 22E-1: DM39_6765
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Entry
DM39_6765 CDS
T03308
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bcen
Burkholderia cenocepacia DDS 22E-1
Pathway
bcen01501
beta-Lactam resistance
bcen02024
Quorum sensing
Module
bcen_M00643
Multidrug resistance, efflux pump MexXY-OprM
Brite
KEGG Orthology (KO) [BR:
bcen00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM39_6765
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DM39_6765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcen02000
]
DM39_6765
01504 Antimicrobial resistance genes [BR:
bcen01504
]
DM39_6765
Transporters [BR:
bcen02000
]
Other transporters
Pores ion channels [TC:
1
]
DM39_6765
Antimicrobial resistance genes [BR:
bcen01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DM39_6765
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DM39_6765
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DM39_6765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIO30380
UniProt:
A0AAN0VK94
LinkDB
All DBs
Position
3:complement(630356..631855)
Genome browser
AA seq
499 aa
AA seq
DB search
MKLLPAVSEFAARARPPVARMRIGLSCAAAALALAGCAVGPDYHRPVVSIPATYSELPGW
TRAAPDADGPKGDWWTAFHDPLLDQLEPLVAVSNQTVRQDYYNYQQALALVREARAGLFP
TLSATTSATRQRSTGSSTTGGAAISNSSALEGTVSWSPDLWGQVRRTVEERNASAQSSAA
TLANATLSEQVTLATTLIDLRVTDANLDLLAATVKADEDYLRVIADQDRAGTIPPSDLVS
AQTQLDSARASLVALGVSRAKYVHAIAVLVGRNPEDLDIPHDATLPSLPDVPVGVPSTLL
QRRPDIAVAERQMAEENAAIGVAVAAYYPTVSLSAAVGFSASPIAGLLHVANYVWSLGAS
ASETLFDGGERSGEVAAAKAAYDAAVANYRGTVLAALQNVEDDLASVRVLADQAAVLERA
VANAKRGADIAFNEYRAGTVDYTTVATAQTTLLGLQENALTVQQERLVATATLFGDLGGG
WSASQLDARQSKQVVGAPE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttctgcccgctgtttccgaattcgcagcccgcgcccggccgcccgtcgcgcgc
atgcgcatcgggctgtcctgtgcggccgccgcgctcgcgcttgcgggctgcgcggttggc
cccgactatcaccgccccgtcgtctcgatccccgcgacatacagcgagctaccgggatgg
acgcgggccgcaccggatgcagacggaccgaagggcgactggtggaccgcgtttcacgat
ccgctgctcgatcagctcgaaccgctcgtcgcggtgtcgaaccagacggttcgtcaggat
tactacaactaccagcaagcgctcgcgctcgtccgcgaggcacgcgcgggcctgtttccg
acgctctcggcgaccacctcggcgacgcggcagcgcagcaccggcagctcgacgacgggc
ggtgcggcgatctcgaacagcagcgcgctcgaaggcacggtgagctggtcgccggacctg
tggggccaggtgcggcgcaccgtcgaggaacgcaacgcgagtgcgcagtcgagcgcggca
acgctcgcgaacgcgacgctgtccgagcaggtgacgctcgcgacgacgctcatcgacctg
cgcgttaccgacgcgaacctcgacctgctcgccgcgaccgtgaaggcggacgaggactat
ctgcgcgtgatcgcggaccaggaccgggccggcacgatcccgccgtccgacctggtgagc
gcccagacgcaactcgacagcgcgcgagcgagcctcgtcgcgctcggtgtatcgcgtgcg
aagtacgtgcatgcgattgcggttctggtcggccgcaatccggaggatctcgacattcca
cacgacgccaccctgccgtcgctgccggacgtgccggtcggcgtgccgtccacgctgctg
cagcggcgtcccgacatcgccgtcgcggaacgacagatggccgaggaaaatgccgcgatc
ggcgtcgcggtcgctgcgtactatccgaccgtttcgctgtcggcggcggtcggcttttcc
gcgtcgccgatcgcagggctgctgcacgtcgcgaactatgtgtggtcgctcggcgccagc
gcatcggaaacgctgttcgacggcggcgaacgcagcggcgaagtcgccgccgcgaaggcc
gcgtacgatgcggcggtcgcgaattatcgcggcaccgtgctcgccgcgctgcagaacgtc
gaggatgatctcgcgagcgtgcgcgtgttagccgatcaggccgccgtgctcgagcgcgcg
gtcgcgaatgcgaagcgcggcgcggacattgcgttcaacgagtatcgggccggcaccgtc
gactacacgacggtcgccaccgcgcagacgacgctgctcggcctgcaggaaaacgcgctg
accgtgcagcaggagcggctggtcgcgacggcaacgctgttcggcgatctcggtggcggg
tggtcggcgtcgcagctggatgcgcggcagtcgaagcaggtggtgggggcgccggagtga
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