Bradyrhizobium daqingense: LPJ38_18140
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Entry
LPJ38_18140 CDS
T07756
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg01501
beta-Lactam resistance
bdg01503
Cationic antimicrobial peptide (CAMP) resistance
bdg02020
Two-component system
bdg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LPJ38_18140
09132 Signal transduction
02020 Two-component system
LPJ38_18140
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LPJ38_18140
01503 Cationic antimicrobial peptide (CAMP) resistance
LPJ38_18140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdg02000
]
LPJ38_18140
02044 Secretion system [BR:
bdg02044
]
LPJ38_18140
01504 Antimicrobial resistance genes [BR:
bdg01504
]
LPJ38_18140
Transporters [BR:
bdg02000
]
Other transporters
Pores ion channels [TC:
1
]
LPJ38_18140
Secretion system [BR:
bdg02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LPJ38_18140
RTX toxin transporter
LPJ38_18140
Multiple protein transporter
LPJ38_18140
RaxAB-RaxC type I secretion system protein
LPJ38_18140
Antimicrobial resistance genes [BR:
bdg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LPJ38_18140
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LPJ38_18140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UFS92553
LinkDB
All DBs
Position
complement(3825603..3827000)
Genome browser
AA seq
465 aa
AA seq
DB search
MMRHRSGVAPVFATWATLALSCALSSTASAEALPDALAKAYQTNPQLNAERARQRATDEN
VPQALAGYRPQIVASLSAGLQSVRNLLPDNTIQTANLKPWIIGVTVTQTLFNGFRTANSV
RAAELQVQSGREALRNVGQGVLLDAVTAYTNVLANQSLVEAQRSNVAFLRETLSVTQRRL
NAGDVTPTDTAQAEARLNRGLADLNAAEVALAVSQATYAQVIGNAPSQLRPAEAVDRYLP
KSREDAMTMAIRQHPAVMAAGFDVDVASTNIRIAEGTLLPSATIQGSASKSRNNDPTLGT
FAEDQASIVANVTAPIYDGGQAAAMTRQAKEITAQSRLVLDQVRNQARTAAVSAWVANEG
AKVTVSASESEVKAATVALQGVQREAAGGQRTTVDVLNSQADLIQAKARLIGAQRDRVIA
SYTLLSAIGHLDVKTLNLNTPDYLPEVHYHQVRDAWHGLRTPSGQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggcatcgatcgggcgtggctcccgtgtttgcgacatgggccacgctggcgctt
tcttgcgccctttcctcgacggcgtcggcagaagccctgcccgatgccctcgccaaggcg
taccagaccaatccgcagctcaacgccgagcgcgcgcggcagcgcgcgaccgacgaaaac
gtgccgcaggccctcgccggctaccgcccgcagatcgtggccagcctcagcgccggcctg
caatcggtgcgcaatctgctgcccgacaacaccatccagaccgccaatctgaagccatgg
atcatcggcgtcaccgtgacgcagactctgttcaacggcttccgcaccgccaacagcgtg
cgcgccgccgaactccaggtgcagtcgggtcgcgaggcgctccgcaatgtcggccagggc
gtgctgctcgatgcggtcaccgcctataccaacgtgctggccaaccagtcgctggtcgaa
gcgcagcgctccaacgtcgccttcctgcgcgaaacactctccgtcacccagcgccgcctc
aacgcgggcgacgtcacgccgaccgacaccgcccaggccgaagcgcgcctcaaccgcggc
cttgccgatctcaacgccgccgaagtcgcgctcgccgtcagccaggccacctatgcgcaa
gtgatcggcaatgccccgtcgcagcttcggcctgccgaagccgtcgaccgctatctgccg
aagagtcgcgaagacgcgatgacgatggcgatccgccagcatccggcggtgatggccgca
ggcttcgatgtcgatgtcgcctccaccaacatccgcatcgccgaaggcacgctgctgccg
agcgccaccatccagggcagcgccagcaagagccgcaacaacgacccgacgctcggcacc
ttcgccgaagaccaggcctcgatcgtcgccaacgtcaccgcgccgatctacgacggcggc
caggccgcggcgatgacgcgccaagccaaggaaatcaccgcgcagagccggctcgtgctg
gatcaggtgcgcaaccaggcgcgcacggcggcggtcagcgcctgggttgccaatgaaggc
gccaaggtcacggtgtcggcctcggagtccgaggtgaaggcggcgaccgtcgcgctccag
ggcgtgcagcgcgaggccgccggcggtcagcgcacgacggtggatgtgctgaactcgcag
gcggatttgatccaggccaaagcccgcttgatcggagcgcagcgcgaccgcgtcatcgcc
tcctacacgctgctcagcgccatcggccatctcgacgtcaagaccttgaacctgaacacg
ccggactacctgcccgaggtgcattaccaccaggtccgcgacgcctggcatggcttgcgg
acgccgtcggggcagtag
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