Paraburkholderia atlantica CCGE1002: BC1002_0076
Help
Entry
BC1002_0076 CDS
T01217
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge01501
beta-Lactam resistance
bge02024
Quorum sensing
Module
bge_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BC1002_0076
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BC1002_0076
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_0076
01504 Antimicrobial resistance genes [BR:
bge01504
]
BC1002_0076
Transporters [BR:
bge02000
]
Other transporters
Pores ion channels [TC:
1
]
BC1002_0076
Antimicrobial resistance genes [BR:
bge01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BC1002_0076
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BC1002_0076
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BC1002_0076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
APG6_N
Motif
Other DBs
NCBI-ProteinID:
ADG14187
UniProt:
D5W9W5
LinkDB
All DBs
Position
1:complement(85057..86637)
Genome browser
AA seq
526 aa
AA seq
DB search
MIMKMSVMRRALASSAEFARGSASNSIRASAVALTLAGALGACTVGPDYVKPAAVTPATW
RELEGTGWKPAQPADTLTRGAWWRIYGDASLDALEPQVASANQDVQAAEARFRAARASVA
QYRSQFFPVVTAGVQYSRTRSSENVLHKSTAGLALNDYLVQVDASWEPDLWGRVSRSVEG
AKAGAQASAADLDAALLSMQAELATDYFELRGLDQERRLLDDTIKAYQEALELTQHRYAG
GIATDADVAQAQTQLKTTQAQALDLGVQRAQLEHAVGILIGQPPSTFTLPVAPLVAVPVI
AAAGVPSGLLERRPDIAAAERHVAAMNAQIGVATAAFFPNLVLAVTGGLEATNYSQWLLA
PSRLWSLGPTLAGTLLDFGGRAAVKEQARAHYDESVAQYRQTVLNAFGQVEDNLAALRVL
EQEAAAQDDAVAAAQRALAVVSDRYRNGAITYLDVVVAQTTTLTNERNAVSIARRRMAAS
VALVKALGGGWDTSVLPGDDALVHPSTATSGATQAPAPASDAGAHS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
gtgatcatgaagatgtcggttatgcggcgcgcgctggcgtcatcggctgaatttgcgcgc
gggtcggcgagcaattccattcgcgcctcggcggtcgcgctgactctcgccggcgcgctc
ggcgcctgcaccgtcggccccgactacgtgaagcccgccgccgtcacacccgcgacctgg
cgcgaactcgaaggcaccggctggaagcccgcgcaaccggccgacacgctcacgcgaggc
gcgtggtggcgcatctacggcgacgcatcgctcgatgcactcgaaccgcaggtcgcgagc
gcgaaccaggacgtgcaggccgccgaggcgcgctttcgcgcggcgcgcgcgagcgtcgcg
caatatcgctcgcaattcttcccggtagtcaccgcgggcgtccagtattcgcgcacgcgg
tcctcggagaatgtgctgcataaatcgaccgccggtctcgcgctgaacgactatctggtg
caggtcgacgcgtcgtgggaacccgacctgtggggccgtgtgtcgcgcagcgtcgaaggc
gcgaaagctggcgcgcaagcgagcgccgccgacctcgacgccgcgctgctgtcgatgcag
gccgagctcgccaccgattacttcgagctgcgcggactcgatcaggagcgccgactactc
gacgacacgatcaaggcctaccaggaggcgctcgaactgacgcagcatcgctacgccggc
ggcatcgcgaccgatgccgatgtcgcgcaggcgcaaacccagctgaagacgacccaggcg
caggcgctcgacctcggcgttcagcgcgcgcagctcgaacatgcggtcgggatcctgatc
ggccagccgccgtcgaccttcacgctgccggtcgcgccactggtcgcggtgccggtgatc
gccgcggccggcgtgccgtccggattgctcgaacggcgtcccgatatcgctgcggccgag
cggcacgtcgccgcgatgaacgcgcagatcggcgtggccaccgcggcgtttttcccgaac
ctcgtgctcgccgtgacgggcggactcgaagcgaccaactacagccagtggctgctcgcg
ccgagccggctgtggtcgctcgggccgacgctcgccggcacgctgctcgacttcggcgga
cgcgcggccgtcaaggagcaggcgcgcgcgcattacgacgaaagcgtcgcgcaatatcgg
caaacggtgctgaacgcgttcggccaggtcgaggacaatctggccgcgctgcgcgtgctg
gaacaggaagcggccgcacaggacgacgcggtcgcggccgcgcagcgcgcgctcgcggtc
gtgtcggaccgctaccggaacggcgcgattacctatctcgacgtggtcgtcgcgcagacg
accacgctcaccaacgagcgcaacgcggtgtcgatcgcacgccgccggatggccgcgagc
gtcgcgctcgtgaaggcgctcggcgggggctgggatacgtcggtactgccgggcgacgat
gcgcttgtacatccgtcgacagcgacttcaggggcgacgcaggcgccggcgccggccagc
gacgccggggcgcacagctag
DBGET
integrated database retrieval system
