Paraburkholderia atlantica CCGE1002: BC1002_1194
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Entry
BC1002_1194 CDS
T01217
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge01501
beta-Lactam resistance
bge02024
Quorum sensing
Module
bge_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BC1002_1194
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BC1002_1194
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_1194
01504 Antimicrobial resistance genes [BR:
bge01504
]
BC1002_1194
Transporters [BR:
bge02000
]
Other transporters
Pores ion channels [TC:
1
]
BC1002_1194
Antimicrobial resistance genes [BR:
bge01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BC1002_1194
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BC1002_1194
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BC1002_1194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADG15279
UniProt:
D5W6Y4
LinkDB
All DBs
Position
1:complement(1335081..1336601)
Genome browser
AA seq
506 aa
AA seq
DB search
MKSLSLSAPALSSRAAVAAAATALALTGCANYFGVKSDKQIASPTQYESTQSLPNEGGQW
PSLDWANQFGDPQLPKLIAEALEGSPSIAQAQARLAKASSYIESSRSALFPKAELNYSWT
RELYSANALFPPPFGGTWFSENNVLASASWDLDLWGKNRQRLGQAVSQQKAAEADMQQAR
VTLAASVASTYNQLAQLYAFRDIAAREIANRQDVGRITDNRVKAGLDTNVEKQTAAGNIA
TSQSNLTDLDGQITVVRYQLGALLGKGPDRGLQIDKPVLTGGNVVALPDNIPADLVARRA
DIVAARWQVEAAMHDVKEAKAEFYPDVNLAAGFGFDAFGWGRFLTSSSRQIQFGPAIHLP
LFDAGALRAQLKGRYADFEGDVANYNQTLINALQDVSTQVSSIRSIDRQEGDAQRALEAS
SKAYQLAVIRYKAGLSPQLQVLTADDNRLAAEQTVTGLQMRRRSLQIGLIKALGGGFDAT
QTGLVVPTDVPASANAANHATSTAAN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccctttccctgtccgcgcccgcactgtcgagccgggccgctgtcgccgccgcg
gcgacggcgctcgccctcacggggtgcgcgaactacttcggcgtcaagagcgacaagcag
atcgcctcgccgacgcagtacgagtcgacgcagagtctgcccaacgaaggcggccagtgg
ccatcgctcgactgggccaaccagttcggggacccgcaactgccgaagctgatcgcggaa
gcgctcgaaggcagcccgtcgatcgcccaggcacaggcgcggctcgcgaaggcttcgtcg
tatatcgaaagctcgcgctcggcgctgttcccgaaggccgaactgaactattcgtggact
cgcgagctgtactcggcaaacgccctcttcccgcctccgttcggcggcacctggtttagc
gagaacaacgtgctcgcgagcgcgtcgtgggatctcgacctgtggggcaagaatcgtcag
cgcctcggccaggccgtgtcgcagcaaaaagccgccgaggctgacatgcagcaggcgcgc
gtgacgctcgccgcgtcggtcgcgagcacctacaaccagctcgcgcagctgtatgcgttc
cgcgacatcgcagcgcgtgaaatcgcgaaccgccaggacgtcggccgtatcacggataac
cgcgtgaaggccggtctcgacaccaatgtcgagaagcagaccgccgccggcaacatcgcg
acgagccagtcgaacctgaccgacctcgacggccagatcaccgtcgtgcgctaccagttg
ggcgcgctgctcggcaaaggcccggaccgtggcctgcagatcgacaagccggtgctcacc
ggcggcaacgtggtcgcgctgccggacaacatcccggccgacctcgtggcgcgtcgcgcg
gacatcgtcgccgcgcgctggcaggtcgaagccgcgatgcacgacgtgaaagaagcgaaa
gccgagttctacccggacgtgaatctcgcggccggcttcggcttcgacgcgttcggctgg
ggccgtttcctgacctcgtcgagccgtcagattcagttcggcccggcgatccatctgccg
ctcttcgacgccggcgcgttgcgtgcgcagctgaagggccgctacgccgacttcgagggc
gacgtcgcgaactacaaccagacgctgatcaacgctctgcaggacgtgtccacgcaggtg
tcgtcgattcgctcgatcgaccgccaggaaggcgacgcccagcgcgcgctcgaggcgtcg
agcaaggcgtaccagctggccgtgatccgctataaggccgggctgtcgccgcaactgcag
gtgctgaccgccgacgacaaccggctcgccgccgagcagacggtcaccggtctgcagatg
cgccgccgcagtctgcagatcggcctgatcaaggcactgggcggcggcttcgacgcgacc
cagaccggcctcgtcgtgccgaccgatgttccggcatcggccaacgccgcgaaccacgcc
acgagcaccgccgcgaactga
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