Paraburkholderia atlantica CCGE1002: BC1002_2023
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Entry
BC1002_2023 CDS
T01217
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bge
Paraburkholderia atlantica CCGE1002
Pathway
bge01501
beta-Lactam resistance
bge02024
Quorum sensing
Module
bge_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
bge00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BC1002_2023
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BC1002_2023
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bge02000
]
BC1002_2023
01504 Antimicrobial resistance genes [BR:
bge01504
]
BC1002_2023
Transporters [BR:
bge02000
]
Other transporters
Pores ion channels [TC:
1
]
BC1002_2023
Antimicrobial resistance genes [BR:
bge01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BC1002_2023
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BC1002_2023
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BC1002_2023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADG16084
UniProt:
D5W9M9
LinkDB
All DBs
Position
1:2267954..2269573
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AA seq
539 aa
AA seq
DB search
MQSPVRKGIAAASVLTILLTIAGCASTGGVAPQTRTINASSLDVGNAIRAANADAQWPAA
DWWRAYNDPQLNQWIADAEAGNPSLAVAQARVREAASMAGVARAALAPHVNGSLSIQREQ
WPDNVFYGPGPLAGEQSWNNTGTLALAYHLDFWGKDKNAAERALDLAHASAADARAAQLE
LQANVVRTYIEMSLSYARLDIAKATLQQQQQIVDLANRRLKGGIGTQLEVSQAETPMPEY
ERQIDAIEENIALGRNQLAALAGKGPGAGDAIQRPTLSLAAPAGLPAALPAELIGHRPDV
VAARWTVAAQARGIDVAKAGFYPDINLLASIGGYAAMGPLFQFLKSPSHSWSVGPALTLP
IFDGGRLRSQLGAASAGYDEAVERYNQSIVTALKDISDQVIRIRSLTTQADDADRSVAAA
RRNYDLSREGFRRGLTDYLNVLVAQNQLLRAQEGVAKVQAERLGAHASLMTALGGGLDDP
ANGPRDNETLPAHGKGNNEGKSGSADNGTAKADANANARTNAVTTATTASRAPNAPASE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtctccggtacgcaaagggatcgccgcagcctcggttcttacgatcctattaaca
atcgccggatgcgcaagtaccgggggcgtggcgccgcaaacgcgcacgatcaatgcttcg
tcgctcgacgtgggcaacgcgattcgcgccgccaacgccgatgcgcagtggcccgccgcc
gactggtggcgtgcctataacgatccgcagctaaaccagtggatcgcggacgcagaagcc
ggcaatccgagtctcgcggtcgcccaggcgcgcgtgcgcgaggcggcgtcgatggccggc
gtcgcgcgcgcggcgctcgcgccgcacgtcaacggcagcctgtcgatccagcgcgagcag
tggcccgacaacgtgttctacggtccggggccgctcgccggcgagcagtcgtggaacaac
accggcacgctcgccctcgcctatcacctcgacttctggggcaaggacaagaatgccgcc
gagcgcgcgctcgacctcgcgcacgcgagcgctgccgacgcgcgcgccgcgcagctcgaa
ctgcaggcgaatgtggtgcgcacctatatcgagatgtcgctgagctacgcgcggctggac
attgcgaaggccacactgcaacaacagcagcaaatcgtcgacctggcgaaccggcgcctg
aagggcggcatcggcacgcagctcgaagtgagccaggccgaaacgccgatgcccgagtac
gagcgccagatcgacgcgatcgaggaaaacatcgcgctcggccgcaatcaattggccgcg
cttgcgggcaaggggccgggcgccggcgacgcgatccagcgcccgacactgtcgctcgcc
gcgcccgccggtctgccggccgctctgcccgcggaactgatcggccaccgccccgacgtg
gtcgcggcgcgctggacggtcgccgcgcaggcgcgcggcatcgacgtcgcgaaggccggg
ttctatccggacatcaacctgctcgcgtcgattggcggctatgcggcgatggggccgctg
ttccagttcctgaagagtccgtcgcatagctggagcgtgggtcccgcgctgacgctgccg
atcttcgacggcggcaggctgcgctcgcagctcggcgccgcgtcggcgggctatgacgaa
gcggtcgagcgctacaaccagtcgatcgtgaccgcgctgaaggacatttccgaccaggtg
atccgcatccgttcgttgaccacccaggccgacgacgccgaccgctcggtcgccgccgcg
cgcaggaactacgatctgtcgcgcgagggcttccggcgcggcctgaccgactatctgaac
gtgctggtcgcgcaaaaccagttgctgcgcgcgcaggaaggcgtcgccaaggtgcaggcc
gagcggctcggcgcgcatgcgtcgctgatgacggcgctcggcggcggtctcgacgatccg
gccaacggtccgcgggataacgaaacgctgccggcgcatggcaagggcaacaacgaaggc
aagagcggctcggcggataacggcacggcgaaggcggatgcgaatgccaacgccaggaca
aacgcagtcaccaccgccaccaccgcctcgcgcgccccgaacgcgcccgcgtccgagtaa
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