Bordetella holmesii ATCC 51541: D560_1928
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Entry
D560_1928 CDS
T03052
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho01501
beta-Lactam resistance
bho02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D560_1928
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D560_1928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bho02000
]
D560_1928
01504 Antimicrobial resistance genes [BR:
bho01504
]
D560_1928
Transporters [BR:
bho02000
]
Other transporters
Pores ion channels [TC:
1
]
D560_1928
Antimicrobial resistance genes [BR:
bho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D560_1928
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
D560_1928
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
D560_1928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AHV94445
LinkDB
All DBs
Position
1812673..1814091
Genome browser
AA seq
472 aa
AA seq
DB search
MPLALAVLLAGCAVGPDYKRPEIDVGVSFKEGQQTVPGWRQAQPADGVVRGQWWSIYGDP
VLDGLMQRLNQANQTIAQAEANYRQAQALVGTARAGFFPTVGASSGLTRSGGGSSSSATT
VGNQYALSGSVSWEPDLWGRVRRELESSRASETASAADLASTRLSAQAALAQNYLQVRVL
DEQKRLLQATVQAYERSLTLTRNRYEAGVAGKADVAVAQTQLESTRAQSLDLDWQRGQYE
NAIAVLIGTAPSQFSLAVAPFTQQLPQIPVGLPAALLQRRPDVAAAERRAAAANAEIGVA
TAAWFPDLTLSASGGFRSGQFADWLTAPARFWSLGPALALTIFDGGAREAQIASARASYD
AQAAAYRLSVLTALREVEDYLVQLRVMEQEQQVQRRALESARESMRLTRNQYEAGLVDYL
SVAVVEATALSSERNAISLLGNRLIASVQLVAALGGGWDGLTPTESGPPGRP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgcctttggcgctggctgtcctgctggcaggctgcgccgtgggtcccgactacaagcgg
cccgagatcgacgtgggcgtttccttcaaagagggccagcagacggtgccaggctggcgg
caggcgcagcccgccgatggcgtggtgcgtggccagtggtggtcgatctatggcgacccg
gtgctcgatggtctgatgcagcggctgaatcaggccaaccagaccatcgcccaggccgag
gccaattaccgtcaagctcaggctctggtcggaacggcgcgggccggctttttcccgacg
gtgggtgcgtcctcggggctgacccgatccggaggtggttcatcttcgagtgccaccacg
gtgggcaaccaatacgcgctcagtggtagcgtgagctgggagccagatctttgggggcgc
gtgcggcgcgagctggagtccagccgtgccagcgaaacggccagcgcggcggatctggcc
tcgacccggctgtcggcccaggccgccctggcgcaaaactacctgcaggtccgcgtgctg
gatgagcagaagcgtttgctccaggcaacggtgcaggcctatgagcgctcgctcacgttg
acccgcaatcgttatgaggcgggcgtggccggcaaggccgatgtggcggtggcgcagacg
cagctggaaagcacgcgcgcgcaatcgctggatctggattggcaacgcggccaatatgaa
aacgcgattgccgtattgattggtacggcgccctcgcagttctcattggcggtggcacct
tttacccagcaattgccgcagatcccggtaggtttgcccgccgcgttgttgcagcgccgc
ccggatgtcgccgcggccgagcggcgtgccgcggccgccaatgccgagatcggcgtagcc
acggcagcctggtttcctgatctgaccttgtctgcatcgggtggttttcgcagcgggcaa
ttcgctgactggttgactgcaccggctcgcttctggtcgctaggtccggcgctggcgctg
acgattttcgatggcggcgcccgcgaggcgcagattgcgtcggcgcgcgccagctatgac
gcccaggcagcggcttaccggctgtcggtgcttaccgcactgcgcgaggttgaggactat
ctggtgcagttgcgcgtcatggagcaggaacagcaagtgcagcgtcgcgcgctggagtct
gcgcgcgagtccatgcgcctgacgcgcaaccagtacgaggccgggctcgtggactatctg
agcgtggccgtggtcgaggccaccgccttgtccagcgagcgcaatgccatcagcttgctg
ggcaatcgtttgatcgccagtgtgcaactggtcgccgcgctgggcggcggctgggatggc
ctgacgccgaccgaatccggcccgccgggccggccctga
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