Burkholderia pyrrocinia: ABD05_13060
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Entry
ABD05_13060 CDS
T03962
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
bpyr
Burkholderia pyrrocinia
Pathway
bpyr01501
beta-Lactam resistance
bpyr02024
Quorum sensing
Module
bpyr_M00642
Multidrug resistance, efflux pump MexJK-OprM
bpyr_M00643
Multidrug resistance, efflux pump MexXY-OprM
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABD05_13060
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ABD05_13060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bpyr02000
]
ABD05_13060
01504 Antimicrobial resistance genes [BR:
bpyr01504
]
ABD05_13060
Transporters [BR:
bpyr02000
]
Other transporters
Pores ion channels [TC:
1
]
ABD05_13060
Antimicrobial resistance genes [BR:
bpyr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ABD05_13060
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
ABD05_13060
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
ABD05_13060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AKM01050
LinkDB
All DBs
Position
1:complement(2858105..2859613)
Genome browser
AA seq
502 aa
AA seq
DB search
MAGCASMGDNKPQSARIEANALDAGAAIRAADRDAGWPAADWWRAYRDPQLDSWIAAAQA
GNPTLAAAEARVREAQAMARVARSAELPQINGNLSLMREHWPDNVFYGPGPLANADTWNN
TGTLGLSYHLDLWGKDKNATERALDTAHATAADARAAKLELEVNVVRAYVGMSMNYALLD
LAHATFERQHSLADLARKRLQAGLGTQLEVSQAESTLPDYERQIDSYEEAIQLARHQLAA
LAGKGPGAGDAIKRPQLSLDAPAGLPSALPADLLGRRPDVVAARWTVDAQARGIDVAKAS
FYPNIDLLATVGGFGVTAPFTDFLRAMNGGWTAGPALSLPIFEGGRLRAQLGAANAGYDQ
AVERYNQTIVGALKDIADQVVRIRSLDTQKKDAARSVAANDRSYQLSREGFRRGLTDYVN
VLIAQQQLLRAQETAARIDAERLAAHAQLMAALGGGVETGKDVPADDVPAAGAAASGAKP
VAAVARPAQVAAAGASGVPAAR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccggatgcgcgagcatgggcgacaacaagccgcagtcggcccgcatcgaggcgaac
gcgctcgacgccggtgccgcgatccgcgcggcagaccgcgacgcgggctggcccgcggcc
gactggtggcgcgcctaccgcgatccgcaactcgattcgtggatcgccgccgcccaggcc
ggcaacccgacgctcgcagccgccgaggcacgcgtacgcgaagcgcaggcgatggcgcgc
gtcgcgcgctcggccgaactgccgcagatcaacggcaacctgtcgctgatgcgcgagcac
tggcccgacaacgtgttctacggcccgggcccgctcgcgaacgccgatacctggaacaac
accggcacgctcggcctgtcgtatcacctcgacctgtggggcaaggacaagaacgcaacc
gagcgcgcgctcgacaccgcgcatgcgaccgccgccgacgcgcgcgcggcgaagctcgag
ctcgaagtcaacgtcgtgcgcgcgtatgtcggcatgtcgatgaactatgcgctgctcgac
ctcgcgcacgcaacgttcgaacgccagcactcgctcgccgatctcgcgcgcaagcggctg
caggccggcctcggcacgcagctcgaagtgagccaggcggaatcgacgctgcccgactac
gagcgccagatcgacagctatgaagaagcgatccagctcgcgcgtcaccagctcgccgcg
ctggccggcaagggcccgggcgccggcgacgcgatcaagcggccgcagctttcgctcgat
gcgccggccggcctgccgtcggcgctgccggccgacctgctcggccgccgccccgatgtg
gtcgcggcgcgctggacggtcgacgcgcaggcgcgcggcatcgatgtcgcaaaggcctcg
ttctacccgaacatcgacctgctcgcgacggtcggcggcttcggcgtgactgcgccgttt
accgacttcctgcgcgcgatgaacggcggctggacggccggccccgcgctgtcgctgccg
atcttcgaaggcggccggctgcgcgcgcagctcggcgccgcgaatgccggctacgaccag
gcggtcgagcgctacaaccagacgatcgtcggcgcgctcaaggacatcgccgaccaggtc
gtgcggatccgctcgctcgatacgcagaagaaggacgccgcgcgttcggtggccgccaac
gaccgcagctaccagctgtcgcgcgaaggcttccgccgcgggctgaccgattacgtgaac
gtgctgatcgcgcaacagcagttgctgcgcgcgcaggagacggcagcccgcatcgacgcg
gaacgccttgccgcgcacgcgcagttgatggccgcgctcggcggcggcgtcgagacgggc
aaggacgttcctgccgacgacgtacccgccgcgggcgccgccgcgtcgggcgcgaagccc
gtggctgcggtcgcccggcccgcgcaggtggccgccgccggcgcgtccggcgtgccggcc
gcacggtaa
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