Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_06635
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Entry
IPI25_06635 CDS
T07026
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Pathway
broc01501
beta-Lactam resistance
broc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
broc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IPI25_06635
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IPI25_06635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
broc02000
]
IPI25_06635
01504 Antimicrobial resistance genes [BR:
broc01504
]
IPI25_06635
Transporters [BR:
broc02000
]
Other transporters
Pores ion channels [TC:
1
]
IPI25_06635
Antimicrobial resistance genes [BR:
broc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IPI25_06635
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
IPI25_06635
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
IPI25_06635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QQR68089
LinkDB
All DBs
Position
complement(1428787..1430220)
Genome browser
AA seq
477 aa
AA seq
DB search
MQDAKNIPAFGFVAACLLVAGCQTTRNIENDITKQIPETFAHTKDSVNSATIVWRQFFSD
TTLIDLIDIAFKNNLDVLMTSQKIEIARADLRLRKGALFPEISGGGSVSQRRFGRYTMDG
AGNRTTDIAPGHTVPTDLPDYHIGLQTTWEMDIWGKLRGKKEAAFARYLGSIEGKNLVLT
NLISEIAITYYELLSLDTELEIIRETIKLQEDAISIVTTQKQVAMANELAVKQFEAQLLH
SRALEVEVLQRITMSENRVNYLLSRFPQPINRKKSILTKEIPAQVMIGIPSDLLENRPDI
KQAEYELMATKADVKSAKKAFYPSFNITGAMGFQAFNPSFLFRSPESIAYTALGSLTFPL
INRSAIQAQFKTAQAKQIEALYNYQKTIIHGFIEVYNEMNNIKNLERAYKLITKKVAALT
QSIEISLELFKTGRANYLEVLIAQQNALQSKLELVNTKQQQFNAGINIYKALGGGWR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagatgctaaaaacataccagcgtttggattcgtggctgcatgcttgcttgtggca
ggttgtcagacaacgagaaatattgagaatgatatcacaaaacaaataccggaaacgttt
gcacacacgaaggattccgtaaattctgcaacaattgtctggcgacaatttttctcggat
actacattaattgatctgatcgatatagcttttaaaaacaacctggacgtattgatgacc
tcgcaaaaaattgaaattgcacgggctgacctgagattacgtaaaggggctttgtttcct
gaaatttccggtggtggctccgtttctcaaagaagattcggacgttacactatggatgga
gcaggaaacaggacaactgatattgcccccggacacacagtgcccaccgatcttcccgat
tatcatatcggtttgcaaactacatgggaaatggatatttggggtaaactccgcggcaag
aaggaagctgcatttgctcgttaccttggcagcatcgaaggaaaaaatctcgtacttact
aacttaatttcggagatagcgattacctattacgagttgttgagtttagacacggaattg
gaaattatcagagaaaccatcaagctgcaggaagatgcgatttccatcgttaccactcaa
aaacaagttgccatggccaatgagttggctgtgaagcagtttgaagcgcaattgttacat
tcaagggcattggaagttgaggttcttcaaagaattaccatgagtgaaaacagagtaaat
tatttattgagcaggtttccacaaccgatcaaccgtaaaaaatcaattctcactaaagaa
attcctgctcaggtaatgatcggcattccatccgatttgttagaaaacaggcctgatata
aaacaagctgagtatgagttgatggccacgaaagcagatgtaaaatcagcaaagaaggca
ttctatccttctttcaacattacgggggcaatgggatttcaggcttttaatccctctttt
ttatttcgatcacctgaatcaattgcgtacacagcattaggtagtttaacttttccatta
attaaccggagcgcgattcaggcacaatttaaaactgcacaagcgaaacagatagaggca
ttgtacaattatcaaaaaaccattatccatggttttatagaagtatataatgaaatgaat
aatattaagaatctggaacgggcatacaaacttataaccaaaaaagtggctgcgttaact
caatctatagaaatatcgttggaattgttcaaaaccggcagggcaaattatttagaggta
ttaatagcacaacaaaatgccctccaatcgaaattagaattagtaaacaccaaacaacaa
caatttaatgccggcataaatatttataaggcacttggtggcggttggagatag
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